DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tspan11

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_005164709.1 Gene:tspan11 / 564029 ZFINID:ZDB-GENE-041210-93 Length:260 Species:Danio rerio


Alignment Length:273 Identity:75/273 - (27%)
Similarity:126/273 - (46%) Gaps:59/273 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 YVSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFY------DVFLNISLVM 96
            :::.|:||::|:.||:||:.||:::|:|::...||.|           |      ..|...:.::
Zfish    12 WITVCLKYLLFVFNFLFWMGGGVVMGVGIWTLVDKGE-----------YLSLLASSTFAVSAYIL 65

  Fly    97 ILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHK 161
            ||||.::.:..|.||...:||....|..|..||||.||:|:...::.:|..|.::..|::..:..
Zfish    66 ILAGGLVMVTGFLGCCAVIREQRSCLSTYFSCLLLIFLIELVAGVLAYVYYQALSEELKQHLSKT 130

  Fly   162 IIHSYRD--DPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATD 224
            ::.:|..  ...:...:|..||:|||||.:||  .||..:.|.  .|.:.:...||.|||...|.
Zfish   131 MMENYAQPGKESITQSVDRLQQDFKCCGSNNS--LDWMHSVYI--MSQAADSRVVPDSCCKTITP 191

  Fly   225 ISSGLVNIMCG--------YGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQ 281
                    .||        |.|:             .|||..:..:...:|.:|....:|:|.:|
Zfish   192 --------QCGRRDHPSNIYKVE-------------GGCITKLEQFLADHLLIIGAVGIGVACLQ 235

  Fly   282 LL-------VIYL 287
            |:       .|||
Zfish   236 LIGAVLTACFIYL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 44/151 (29%)
penumbra_like_LEL 144..267 CDD:239411 31/132 (23%)
tspan11XP_005164709.1 Tetraspanin 17..246 CDD:459767 71/264 (27%)
CD151_like_LEL 113..221 CDD:239408 31/132 (23%)

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