DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tspan9a

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_073785985.1 Gene:tspan9a / 555341 ZFINID:ZDB-GENE-060503-632 Length:336 Species:Danio rerio


Alignment Length:260 Identity:80/260 - (30%)
Similarity:126/260 - (48%) Gaps:43/260 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLV-MILA-GTVIF 104
            |:|||:|:.|.:|||.|..|||:|::.     ..:.||  ...|...|.::|.. |::| |.::.
Zfish   105 CLKYMMFVFNLIFWLCGCGLLGVGIWL-----SVSQGS--FATFSPSFPSLSAANMVIAIGAIVM 162

  Fly   105 LVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLE--KQFTHKIIHSYR 167
            :..|.||:||::||..||..:.:.||:..|.|:.:.|:.||   |.:...|  ||.....:..|.
Zfish   163 VTGFLGCLGAIKENKCLLLSFFIVLLIILLAELILLILFFV---YSDKVSENAKQDLKDGLALYN 224

  Fly   168 DDPD--LQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGLV 230
            .|.:  |:|..:..|.|:||||:  :||.||         ..::::..||..||.....      
Zfish   225 TDNNIGLRNAWNIIQAEWKCCGV--TGYTDW---------HDALKEKVVPDRCCQEHYQ------ 272

  Fly   231 NIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEGQI 295
              .||        ..:|.:.||.||.|.|..|.|.|.:::....:.|.::|||.:..:.||..||
Zfish   273 --ECG--------RNSTNMFWTRGCYEKVEEWLEDNKHLLGTIGMCILVVQLLGMAFSMTLFHQI 327

  Fly   296  295
            Zfish   328  327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 49/149 (33%)
penumbra_like_LEL 144..267 CDD:239411 35/126 (28%)
tspan9aXP_073785985.1 None

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