DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and zgc:113223

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_009304086.1 Gene:zgc:113223 / 541424 ZFINID:ZDB-GENE-050320-127 Length:275 Species:Danio rerio


Alignment Length:261 Identity:96/261 - (36%)
Similarity:146/261 - (55%) Gaps:33/261 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILAGTVIFL 105
            :.|||.:|:..:|||:|...|:.:|:||...|..|...::..:.        :|::|:.|:::|.
Zfish    11 RAVKYTLFVCCYVFWVFSAGLIAVGIYAKIAKESDVVDTLMADP--------ALLLIVVGSLMFT 67

  Fly   106 VSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEK------QFTHKIIH 164
            ::|.||.||||..:.||..:...||:..||::..|::..:       |.||      |...|.|.
Zfish    68 ITFLGCFGALRNASLLLNMFVAILLVVLLLQVTAAVLGLL-------FSEKVQERTEQLMMKAIV 125

  Fly   165 SYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCS--SPSVEKCGVPYSCCI---NATD 224
            .||||.||:|.|||.|::|||||:.:  |.|||||.|||.|  :||:|..|||:||||   |.| 
Zfish   126 RYRDDQDLENVIDFVQKKFKCCGVDS--YLDWSKNMYFNSSEHNPSLEAYGVPFSCCIRQKNET- 187

  Fly   225 ISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAK 289
                :.|.||||..|......|.:||:||||::.:..|.:.||.::.|..|.:..:::.....||
Zfish   188 ----VFNSMCGYETQKMKKSLAGRLIYTSGCLDEMVWWGQQNLLLVGGMTLVLLCLEVRFFSPAK 248

  Fly   290 T 290
            :
Zfish   249 S 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 96/260 (37%)
penumbra_like_LEL 144..267 CDD:239411 58/133 (44%)
zgc:113223XP_009304086.1 Tetraspannin 13..241 CDD:278750 94/249 (38%)
penumbra_like_LEL 106..226 CDD:239411 58/133 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D1416189at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.830

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