DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tspan14

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001007871.1 Gene:tspan14 / 493257 XenbaseID:XB-GENE-868280 Length:270 Species:Xenopus tropicalis


Alignment Length:275 Identity:111/275 - (40%)
Similarity:163/275 - (59%) Gaps:18/275 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 HHFTY----VSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDK--WEDANGSVRLENFYDVFLNI 92
            |::.|    ||.|.||::|..|.:|||.|.:|||:|::|:.:|  ..|.....||..|..|:|  
 Frog     2 HYYRYSTAEVSCCYKYLLFSYNIIFWLSGMVLLGVGLWAWSEKGILSDITKVTRLHGFDPVWL-- 64

  Fly    93 SLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQ 157
               :::.|.::|.:.|:|||||||||..||||:...::|.|.:|:|:|::.|:...::.. ..|.
 Frog    65 ---VLVVGVIMFTLGFAGCVGALRENICLLKFFCGAIVLIFFMELAVAVLAFLFQDWVKD-RAKD 125

  Fly   158 FTHKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCS--SPSVEKCGVPYSCCI 220
            |....|.|||||.||||.||..|:..:|||..:.  .||..|||||||  :||.|:||||:|||:
 Frog   126 FFENNIKSYRDDIDLQNLIDSLQKANQCCGAVSP--DDWDLNEYFNCSVENPSRERCGVPFSCCV 188

  Fly   221 NATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVI 285
              .|.:..:||..|||..:.....|.....::.|||..:..|...|:|::||..|.|:::|:..|
 Frog   189 --PDPAQTVVNTQCGYDARRKKPNERPNTTFSKGCISALEAWLPRNIYIVAGVFLVISILQIFGI 251

  Fly   286 YLAKTLEGQIELQKS 300
            |||:||...||..|:
 Frog   252 YLARTLMSDIEAVKA 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 104/256 (41%)
penumbra_like_LEL 144..267 CDD:239411 49/124 (40%)
tspan14NP_001007871.1 TM4SF9_like_LEL 113..233 CDD:239412 49/124 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X349
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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