DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tspan5a

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001006047.1 Gene:tspan5a / 450026 ZFINID:ZDB-GENE-041010-145 Length:271 Species:Danio rerio


Alignment Length:289 Identity:121/289 - (41%)
Similarity:165/289 - (57%) Gaps:26/289 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GRGYSGIEVHEVMHPHHFTYVSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGS--VR 81
            |:.|.|.|            ||.|:||.||..|.:|||.|...||||::|:.:|...:|.|  ..
Zfish     3 GKHYKGQE------------VSCCIKYFIFGFNIIFWLLGVAFLGIGLWAWSEKGVLSNISSITD 55

  Fly    82 LENFYDVFLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVC 146
            |..|..|:|     .::.|.|:|::.|:||:||||||||||||:|:.|.:.|.||:...|:.||.
Zfish    56 LGGFDPVWL-----FLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGILAFVF 115

  Fly   147 PQYMNTFLEKQFTHKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNC--SSPSV 209
            ..::...| ..|.:..|.:||||.||||.|||.|:.::|||.  .|..||:.|.||||  |:||.
Zfish   116 KDWIKDQL-NFFINNNIRAYRDDIDLQNLIDFTQEYWECCGA--FGADDWNLNIYFNCTDSNPSR 177

  Fly   210 EKCGVPYSCCINATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNA 274
            ||||||:|||  ..|.:..::|..|||.|:..|..|....|...||:.....|.:.||.|:||..
Zfish   178 EKCGVPFSCC--TKDPAEDVINTQCGYDVRAKPDAEQKTYIHVKGCVPQFEKWLQDNLTVVAGIF 240

  Fly   275 LGIALIQLLVIYLAKTLEGQIELQKSRWL 303
            :||||:|:..|.||:.|...||..::..|
Zfish   241 IGIALLQIFGICLAQNLVSDIEAVRASCL 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 112/256 (44%)
penumbra_like_LEL 144..267 CDD:239411 52/124 (42%)
tspan5aNP_001006047.1 Tetraspannin 14..261 CDD:278750 112/256 (44%)
TM4SF9_like_LEL 113..233 CDD:239412 52/124 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X349
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.890

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