DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp96F

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001262976.1 Gene:Tsp96F / 43127 FlyBaseID:FBgn0027865 Length:284 Species:Drosophila melanogaster


Alignment Length:268 Identity:63/268 - (23%)
Similarity:116/268 - (43%) Gaps:37/268 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILA-GTVIFL 105
            ||||::.|:|.:|||.|..::...|:..    .|....:.:...|:.: :|:|.:.|| |.:|.|
  Fly     9 CVKYLMVLINILFWLIGLTIVVTSVWML----TDPTFMLSMTQNYNHY-HIALYVFLAIGILITL 68

  Fly   106 VSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHSYRDDP 170
            .:|.||.|..||:..||..:...:|:..:.::|.....|.....::..:.......:...|....
  Fly    69 GAFFGCCGVCRESQCLLVSFFCVILIVMVAQIAAGAWAFHNKDKLDDIVRAAVKSSVQEEYGQST 133

  Fly   171 DLQNFIDF--AQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGV---------PYSCC----- 219
            .....:.|  .|:..||||....|  ||:.:.:.|....::.:..|         |.|||     
  Fly   134 MSSRTVTFDTLQKNLKCCGADGPG--DWATSRFNNVDRTNIVEIAVSSMNVFYNIPESCCKDNLK 196

  Fly   220 INATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIE-IVRVWAEHNLYVIAGNALGIALIQLL 283
            .|..::|.   .:..|..:.||        |:..||:: ::.:..|:.:.:.|..| .:.|::||
  Fly   197 DNECELSR---RLKFGGPLNNA--------IYQQGCVDKLIEIIYENWVTIFAVTA-AVILLELL 249

  Fly   284 VIYLAKTL 291
            .:..|.:|
  Fly   250 SLTFALSL 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 63/268 (24%)
penumbra_like_LEL 144..267 CDD:239411 26/139 (19%)
Tsp96FNP_001262976.1 Tetraspannin 9..261 CDD:278750 63/268 (24%)
CD151_like_LEL 107..233 CDD:239408 26/138 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442971
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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