DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp66E

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster


Alignment Length:272 Identity:66/272 - (24%)
Similarity:119/272 - (43%) Gaps:47/272 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWE-----DANGSVRLENFY--DVFLNISLVMILA 99
            |.||::.:.||:|::.|.::.|:|::...||..     ....|.|:|.|.  .....::.|:::.
  Fly     9 CAKYLLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQLAYVLLVI 73

  Fly   100 GTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLE-------KQ 157
            |.|:|.:||.|.:||:||:..||..|...|:|..:.|:...        .:..|.:       |.
  Fly    74 GAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAG--------GLGAFFKDKVRAESKN 130

  Fly   158 FTHKIIHSYR--DDPDLQNFI-DFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCG---VPY 216
            |....|.||.  ::.|..:.: :.....|.|||:::  |.|      |:.|...|...|   :|.
  Fly   131 FLQTTITSYSLGENVDATSLMWNQLMGNFGCCGIND--YHD------FDASPAWVNGKGNRTIPD 187

  Fly   217 SCCINATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVW--AEHNLYVIAGNALGIAL 279
            :||| ..|::.     :..........|..:...:..||.|:...|  .:..|.::   |:.:.:
  Fly   188 ACCI-LKDVAK-----LVPRDEDCTTNPSDSNSFYKKGCYEVFTEWLIRQRELVIV---AIAVGI 243

  Fly   280 IQLLVIYLAKTL 291
            :.|::|.||..|
  Fly   244 VHLVLIILAFAL 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 66/272 (24%)
penumbra_like_LEL 144..267 CDD:239411 27/137 (20%)
Tsp66ENP_523985.1 Tetraspannin 9..258 CDD:278750 66/272 (24%)
uroplakin_I_like_LEL 116..231 CDD:239409 27/128 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442966
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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