DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tspan2a

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001018160.1 Gene:tspan2a / 378854 ZFINID:ZDB-GENE-050522-511 Length:211 Species:Danio rerio


Alignment Length:257 Identity:63/257 - (24%)
Similarity:114/257 - (44%) Gaps:71/257 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLEN------FYDVFLNISLVMILA 99
            :||||::|:.||:|||.|.|:|.:|::.   :::....|:..||      |..|:     ::|.|
Zfish     9 KCVKYLLFVFNFIFWLSGSLVLAVGLWL---RFDPDTTSLLSENDAPENFFIAVY-----ILIGA 65

  Fly   100 GTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIH 164
            |.::.:|.|.||.||:||:..||..:..||||.|..|:|..:.         .||.|.   :|| 
Zfish    66 GGIMMIVGFFGCFGAVRESQCLLGSFFACLLLIFGAEVAAGVF---------GFLNKD---QII- 117

  Fly   165 SYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGL 229
                 .::||:                 |:..:|.|                    |.|.|:|..
Zfish   118 -----KEVQNY-----------------YESATKME--------------------NGTVITSAF 140

  Fly   230 VNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTL 291
            .:::...|.:::|:...|:  ....|::.:..:....|::|....:|||.:.::.:..:..|
Zfish   141 HSVLDCCGTESSPIETCTE--GNKDCVQAIEDFFNEKLFIIGYVGIGIAGVMVIGMIFSMVL 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 45/149 (30%)
penumbra_like_LEL 144..267 CDD:239411 18/122 (15%)
tspan2aNP_001018160.1 Tetraspanin 11..202 CDD:459767 62/255 (24%)

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