DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tspan32

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001406772.1 Gene:Tspan32 / 365390 RGDID:1308721 Length:252 Species:Rattus norvegicus


Alignment Length:160 Identity:37/160 - (23%)
Similarity:62/160 - (38%) Gaps:29/160 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 KYMIFLLNFVFWLFGGLLLGIG------VYAFRDKWEDANGSVRLENFYDV------FLNISLVM 96
            |..|.:.||..     ||||:.      |..|.|.:.....:....|.|:.      ::.|||..
  Rat    11 KCQILITNFFV-----LLLGLSLATMTVVTHFGDHFTVIGHASLQRNPYETLRYWAFYVGISLAG 70

  Fly    97 ILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCP-QYMNTFLEKQFTH 160
            :|:     |.:....:..:||...|:....:|..|.|.:.:.:|...|..| |..:..|:   |:
  Rat    71 LLS-----LGAALSTIATVREAHGLMAAGFLCFALSFCILVQVAFWRFHNPTQVEDAVLD---TY 127

  Fly   161 KIIHSY-RDDPDLQNFIDFA--QQEFKCCG 187
            .:::.. ...|....:.:.|  |..|.|||
  Rat   128 DLVYDQAMKSPSSSWWQELAVIQDTFLCCG 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 35/158 (22%)
penumbra_like_LEL 144..267 CDD:239411 12/48 (25%)
Tspan32NP_001406772.1 Tetraspanin 11..>157 CDD:459767 35/158 (22%)
PHEMX_like_LEL 113..195 CDD:239406 12/48 (25%)

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