DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tspan31

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001008379.1 Gene:Tspan31 / 362890 RGDID:1309876 Length:210 Species:Rattus norvegicus


Alignment Length:272 Identity:58/272 - (21%)
Similarity:93/272 - (34%) Gaps:99/272 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLV--MILAGTVIF 104
            |.|..:..||.|:.|.|.||:|:..      |....|         |..:|.::  :|..|..:.
  Rat     8 CSKNALCALNVVYMLVGLLLIGVAA------WGKGLG---------VVSSIHIIGGVIAVGVFLL 57

  Fly   105 LVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNT----------FLEKQFT 159
            |::.:|.|||:..:..||.||.:.|.|.|:.:..|:..|....:  ||          .|.....
  Rat    58 LIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFGISCSCLAINR--NTQADVINASWWVLSNSTR 120

  Fly   160 HKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSG----YQDWSKNEYFNCSSPSVEKCGVPYSCCI 220
            |::                 ::.|.||||.|..    :.|.|      ||:    .|....|.| 
  Rat   121 HEL-----------------ERSFDCCGLFNLTTVHLHDDAS------CSA----LCKTRSSPC- 157

  Fly   221 NATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHN---LYVIAGNALGIALIQL 282
                       .|||                        ..:.:|:   |.::.|..|..:..::
  Rat   158 -----------QMCG------------------------ETFLKHSDKALKILGGVGLFFSFTEI 187

  Fly   283 LVIYLAKTLEGQ 294
            |.::||.....|
  Rat   188 LGVWLAMRFRNQ 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 35/155 (23%)
penumbra_like_LEL 144..267 CDD:239411 21/139 (15%)
Tspan31NP_001008379.1 Tetraspanin 9..196 CDD:459767 56/266 (21%)

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