Protein Alignment Tsp3A and lbm

DIOPT Version :10

• Sequence 1: NP_525054.2
• Gene: Tsp3A / 31244
• FlyBaseID: FBgn0040334
• Length: 304
• Species: Drosophila melanogaster
• Sequence 2: NP_523639.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Alignment Length: 255
• Identity: 58/255 - (22%)
• Similarity: 96/255 - (37%)
• Gaps: 75/255 - (29%)

  Fly    43 VKYMIFLLNFVFWLFGGLLLG-IGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILAGTVIFLV 106
            ||....:||.|   .|.|..| ||       |...|.....|.|.       :...:|.::|.:.
  Fly     8 VKIASIVLNAV---LGFLAAGAIG-------WIAYNADTETEEFV-------IAAYIACSLILVF 55

  Fly   107 SFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKI-IHSYRDDP 170
            :..|...|:||:..|....::.||:..:|            |.::|.|   |.|:. :.|.||..
  Fly    56 ALLGIFAAIRESVVLTATSAVFLLILAIL------------QIVSTCL---FLHEFDVKSGRDMV 105

  Fly   171 DL---QNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGLVNI 232
            ::   .|.:|..||:.:|||.|       |..:|.:.|      ..:|.||
  Fly   106 EVAWQANNMDSLQQKHECCGQS-------SAQDYIHLS------LLIPPSC-------------- 143

  Fly   233 MCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHN---LYVIAGNALGIALIQL-LVIYLA 288
                   .|.:.:....::..||||.|:.:.|.:   ..:::...:...||.. |.::||
  Fly   144 -------YADLQQTPDHLYLDGCIEKVQSFYESDKLRFIIVSWVLVAFELICFALAVFLA 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp3A	NP_525054.2	Tetraspanin	43..>187	CDD:459767	37/148 (25%)
		penumbra_like_LEL	144..267	CDD:239411	29/129 (22%)
lbm	NP_523639.1	Tetraspanin	<47..196	CDD:459767	42/197 (21%)
		tetraspanin_LEL	<109..169	CDD:239401	20/93 (22%)