DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp42Ei

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001260756.1 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster


Alignment Length:291 Identity:53/291 - (18%)
Similarity:102/291 - (35%) Gaps:99/291 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILA-GTVIFLV 106
            ||:::.||||||.:.|..|:..|::....         ..||...:..|::..:|:| |.||.::
  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLIS---------AAENAVSIGKNVAGGLIIALGVVILII 63

  Fly   107 SFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHSYRD--- 168
            :..||:.|:.|....|..|...::|..|.::.                   |.....|..:|   
  Fly    64 AIFGCLAAIHEAPVRLLIYVGAVVLLILAQLI-------------------FLGMSSHGTKDGIS 109

  Fly   169 -------------DPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCI 220
                         :.:....:.:.:...:|||:::|       .:|:      :...|:|.||| 
  Fly   110 GSINEGFDRLWESERNQTGALSYYESWLQCCGVNSS-------EDYW------IIHHGIPSSCC- 160

  Fly   221 NATDISSGLVNIMCGYGVQNAPVPEATKL-----IWTSGCIEIVRVWAEHNLYV--------IAG 272
                                   ||:..:     ::.:||......:.:..|.|        :.|
  Fly   161 -----------------------PESKCMDTPSRVFKTGCKAAFVKYLDDKLLVFKIVCWLLVIG 202

  Fly   273 NALGIALIQLLVIYLAKTLEGQIELQKSRWL 303
            .|:|.....||.    .:::.|.....:.|:
  Fly   203 EAVGAVFGWLLY----SSVKNQSRRNNAVWM 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 51/281 (18%)
penumbra_like_LEL 144..267 CDD:239411 17/143 (12%)
Tsp42EiNP_001260756.1 Tetraspannin 7..217 CDD:278750 51/277 (18%)
DUF373 <17..>101 CDD:299895 23/111 (21%)
tetraspanin_LEL 104..189 CDD:239401 15/121 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442963
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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