DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp42Eh

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:205 Identity:43/205 - (20%)
Similarity:93/205 - (45%) Gaps:31/205 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILAGTVIF 104
            ::.::|::.:::.:..|.|.||:..|.:.. |...:....:.:::..|:   .:::.:|.||||.
  Fly     5 TRLLRYVLCVISGICALGGCLLIWYGAWLL-DSLSEEQRMLGMDHGEDL---AAVLCVLLGTVIV 65

  Fly   105 LVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHSYRDD 169
            :.|..|.|...:::..||..|::.|:...::::.:..:.:..        .:.|....:....||
  Fly    66 VASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAA--------SRDFLPDSLRQGLDD 122

  Fly   170 P-DLQ----NFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGL 229
            . |||    :.::..::...|||.:       |..:|.:     :||...| |||:| .|.:..|
  Fly   123 LWDLQHEGNSTLNTYEEWLHCCGRN-------SAEDYLH-----LEKMPPP-SCCLN-RDCTKHL 173

  Fly   230 VNIMCGYGVQ 239
            ...|.|..|:
  Fly   174 NLFMTGCEVK 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 27/148 (18%)
penumbra_like_LEL 144..267 CDD:239411 23/101 (23%)
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 43/202 (21%)

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