DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp42Ee

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster


Alignment Length:279 Identity:62/279 - (22%)
Similarity:110/279 - (39%) Gaps:81/279 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VKYMIFLLNFVFWLFG--GLLLG------IGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILA 99
            |||::|:.|.:..:.|  |::.|      |||.       :.||.|.    :.:...:.:::|..
  Fly     8 VKYILFIFNTIVSVIGILGIVYGVLILKSIGVV-------EVNGQVG----FPIQALMPIILISL 61

  Fly   100 GTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFV----CPQYMNTFLEKQFTH 160
            |:::..:||.||.||:||:..:...|:..||:..:|::...::.|.    ....|...:|..:..
  Fly    62 GSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNS 126

  Fly   161 KIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCG----VPYSCCIN 221
            :  |:|:.     ...|..|:...|||                 ||.:::..|    ||.|||  
  Fly   127 E--HTYKG-----GVFDTIQKSLHCCG-----------------SSSALDYIGKGDLVPPSCC-- 165

  Fly   222 ATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGC----IEIVRVWAEHNLYVIAGNALGIALIQL 282
                 ||...|...|               ..||    :|::...:::..||    .:|:..|:|
  Fly   166 -----SGSCLIPTNY---------------YPGCRGKFVELMTTGSDNAKYV----GIGLIGIEL 206

  Fly   283 LVIYLAKTLEGQIELQKSR 301
            :....|..|...:...|.|
  Fly   207 IGFIFACCLANNVRNYKRR 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 60/271 (22%)
penumbra_like_LEL 144..267 CDD:239411 25/134 (19%)
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 60/271 (22%)
tetraspanin_LEL 106..187 CDD:239401 25/126 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442961
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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