DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp39D

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster


Alignment Length:254 Identity:63/254 - (24%)
Similarity:116/254 - (45%) Gaps:47/254 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRL-----ENFY-DVFLNISLVMILAG 100
            ||||:.|..|.:|.|.|.|:..:|            |.|:|     .||. |......:::::.|
  Fly     8 CVKYLTFFCNLLFALTGLLIFLVG------------GMVQLNYAHYSNFVSDHVWTAPIILMIVG 60

  Fly   101 TVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHS 165
            ..:.::.|.||.|||:|::.::..:::..::.||.|:.:.:..:|....::..:|.||...:.| 
  Fly    61 AAVAVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQH- 124

  Fly   166 YRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGLV 230
            |::..|.::.....|.|..|||:  :|..|| :..|.|.:        :|.:||        .::
  Fly   125 YKERADYRDAWTLLQTELDCCGI--NGPNDW-ETVYRNST--------LPAACC--------SVI 170

  Fly   231 NIMCGYGVQNAPVPEATKLIWTS-GCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLA 288
            |:        :...|.|....|. ||::.:....:....::|...||:|.||:|.|..|
  Fly   171 NL--------SEAKECTNTHATQHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFA 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 37/149 (25%)
penumbra_like_LEL 144..267 CDD:239411 26/123 (21%)
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 62/253 (25%)
tetraspanin_LEL 131..>167 CDD:351888 11/46 (24%)

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