DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp33B

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster


Alignment Length:297 Identity:61/297 - (20%)
Similarity:103/297 - (34%) Gaps:92/297 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 HFTYVSQCVKYMIFLLNFVFW--------------LFGGLLLGIGVYA-------------FRDK 72
            |...:::.|..::.|:...::              |..|.|.||.|:.             :|..
  Fly    13 HLLLITEAVIGLLILVVTAYYHTVLTGYLSDIECRLVYGYLFGIYVFGAQVVVTFLCSIAMWRRI 77

  Fly    73 W-EDANGSVRLENFYDVFLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLE 136
            | .....::||  ...|:...|.|:|.:|        .|||..|.....:|:             
  Fly    78 WRRRCTPNIRL--LLSVWAFYSCVIIASG--------FGCVWNLYRGVDVLE------------- 119

  Fly   137 MAIAIVCFVCPQYMNTFLEKQFTHKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEY 201
                       ...:|.|.:.     |..|...|:.:...|..|...:|||:  .||:||...|:
  Fly   120 -----------NAADTSLTRG-----IDMYYSCPEWKLLWDGLQWHKECCGV--HGYKDWMNAEW 166

  Fly   202 F-----NCSSPSVEKCGVPYSCCINATDISSGLVNIMCGYGV-----QNAPVPEAT-KLIWTSGC 255
            .     ||:|..:    .|::||..:.|  |...|.:...|.     ...|.|..| ..|..:||
  Fly   167 MPRRENNCTSMVL----APFACCKRSCD--SCFNNFLPSEGQSIGGNSRQPFPALTVDSINANGC 225

  Fly   256 IE--IVRVWAEHNLYVIAGNALGIALIQLLVIYLAKT 290
            :.  :..||  :..|::.  ||.:..::.|::....|
  Fly   226 LPAFVSAVW--NCFYILM--ALWVLALKFLIVLCCMT 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 60/290 (21%)
penumbra_like_LEL 144..267 CDD:239411 33/135 (24%)
Tsp33BNP_523552.1 Tetraspannin 20..256 CDD:278750 59/286 (21%)
CD151_like_LEL 112..237 CDD:239408 34/163 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442970
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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