DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp29Fb

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001137809.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster


Alignment Length:285 Identity:69/285 - (24%)
Similarity:126/285 - (44%) Gaps:62/285 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISL----------- 94
            :|.|||:.:::|:|.|...||:.:|.                 ....:|.:.||           
  Fly    13 KCAKYMLIIVSFMFALTAILLIMVGT-----------------TIQTIFGDFSLFIDGHFSSPPA 60

  Fly    95 VMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFT 159
            ::|..|.::..|:..|..||::|:..::..|.:||.|.|:||::.||..||....:...|.:.. 
  Fly    61 LLIAIGFILIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTM- 124

  Fly   160 HKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCS---SPSVEKCGVPYSCCIN 221
            ::.:..|..||.:::.:||.|...:|||::..  :||  .:|.:.:   :..|:...||.|||  
  Fly   125 NQALAEYEHDPYVESGVDFMQSMLECCGVNEP--EDW--KDYLSANVNFTLGVDDVVVPNSCC-- 183

  Fly   222 ATDISSGLVNIMCGYGVQNAPVPEATKL----IWTSGCIEIVRVWAEHNLYVIAGNALGIALIQL 282
                           |.|...:.::|::    .:..||...:......:..:||..|..:|.:||
  Fly   184 ---------------GNQPTSLNDSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQL 233

  Fly   283 L----VIYLAKTLEGQIELQKS-RW 302
            |    ...|||||.....:::: ||
  Fly   234 LGVLCAFMLAKTLRRNKSIREARRW 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 67/274 (24%)
penumbra_like_LEL 144..267 CDD:239411 26/129 (20%)
Tsp29FbNP_001137809.1 Tetraspannin 14..246 CDD:278750 65/270 (24%)
tetraspanin_LEL 110..218 CDD:239401 26/129 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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