DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp29Fa

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster


Alignment Length:265 Identity:64/265 - (24%)
Similarity:123/265 - (46%) Gaps:37/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFL-----NISLVMILA 99
            :..|||.:|..|.:|.:.|.:|:.:|.           |...:...|.:||     :|...:|:.
  Fly     8 ANAVKYTLFGFNLIFLITGIILIAVGA-----------GVGAVYTGYKLFLAGKFFSIPTFLIVI 61

  Fly   100 GTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIH 164
            |:.|.::||.||.|||:||..|:..:|:.|.:.|:||:|..|..:|.....:..::...|:.:..
  Fly    62 GSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNE 126

  Fly   165 SYRDDPDLQNFI-DFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSG 228
            ....:|:....: |..|.||:|||:::  |.||.      .:.|:.:   :|.|||    ::..|
  Fly   127 YNSINPNATTKLWDDIQDEFECCGVTS--YNDWI------TAFPNGD---LPISCC----NVHVG 176

  Fly   229 LVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEG 293
            .|........|:: |.:..|:    ||::....:...:...:....:.||::|...:..|..:..
  Fly   177 AVGTFTCNNAQSS-VADRHKV----GCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAR 236

  Fly   294 QIELQ 298
            :|:::
  Fly   237 EIKIR 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 63/258 (24%)
penumbra_like_LEL 144..267 CDD:239411 25/123 (20%)
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 63/257 (25%)
tetraspanin_LEL 106..210 CDD:239401 25/123 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442968
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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