DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp26A

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster


Alignment Length:310 Identity:100/310 - (32%)
Similarity:153/310 - (49%) Gaps:57/310 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVR-LENFYDVFLNISLVMILAGTV 102
            :|.|:||::|..|.:.||...|:|.:|::|:.:|     |..| :...:.:.|:.:.|:|:.|.|
  Fly    15 ISCCLKYLLFASNVILWLSALLVLSVGIWAWSEK-----GMFRNIARLHFIALDPAFVLIILGGV 74

  Fly   103 IFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKI---IH 164
            .||:.|.|.||||||||.||..|::.|.:..:.|:....|.||...  ..:::.|.|..:   |.
  Fly    75 TFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKD--KGWIKDQATEGLKAFIR 137

  Fly   165 SYRDDPDLQNFIDFAQQEF-KCCGLSNSGYQDWSKNEYFNCSSPSV---EKCGVPYSCCINATDI 225
            .||:|.|.||.||:.|::: :|||:  .|.:||..|.||||||.::   |.||||:|||....  
  Fly   138 HYREDADQQNLIDWIQEDWLQCCGI--DGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRP-- 198

  Fly   226 SSGLVNIMCGYGVQNAPVP--------------------------------------EATKLIWT 252
            ...:.|..|||.|:....|                                      |.:|:|:.
  Fly   199 QEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKIIYE 263

  Fly   253 SGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEGQIELQKSRW 302
            .||::....|.||||.:|:...:.:...|:|.|..|:.|...|..|||:|
  Fly   264 KGCVQAGEEWMEHNLIIISATVIVVMFFQILGICFAQNLRADIYTQKSKW 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 94/298 (32%)
penumbra_like_LEL 144..267 CDD:239411 49/167 (29%)
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 78/245 (32%)
DUF2207 <65..157 CDD:303056 36/93 (39%)
TM4SF9_like_LEL 118..239 CDD:239412 39/126 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442893
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X349
65.850

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