DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tspan17

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_021336653.1 Gene:tspan17 / 324950 ZFINID:ZDB-GENE-030131-3673 Length:277 Species:Danio rerio


Alignment Length:275 Identity:120/275 - (43%)
Similarity:165/275 - (60%) Gaps:16/275 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 HHF--TYVSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGS--VRLENFYDVFLNISL 94
            |||  ..||.||||.:|..|.:|||.|...||||::|:.:|...:|.|  ..|..|..|:|    
Zfish    13 HHFKGAEVSCCVKYFLFGFNIIFWLLGAAFLGIGLWAWAEKGVLSNISSITDLGGFDPVWL---- 73

  Fly    95 VMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFT 159
             .|:.|.|:|::.|:||:||||||||||||:|:.|.|.|.||:...|:.||...::...| ..|.
Zfish    74 -FIVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGLIFFLELTAGILAFVFKDWIKDQL-NFFI 136

  Fly   160 HKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCS--SPSVEKCGVPYSCCINA 222
            :..:.:||||.||||.|||||:.:.|||.  .|..||:.|.||||:  :||.|:||||:|||:. 
Zfish   137 NNNVKAYRDDIDLQNLIDFAQEYWSCCGA--HGPNDWNLNIYFNCTDFNPSRERCGVPFSCCVK- 198

  Fly   223 TDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYL 287
             |.:..::|..|||.|:.....:..|.|:|.||:.....|.:.||.|:||..:||||:|:..|.|
Zfish   199 -DPAEDVLNTQCGYDVRLQVELDQQKYIYTKGCVGQFEKWLQDNLIVVAGVFVGIALLQIFGICL 262

  Fly   288 AKTLEGQIELQKSRW 302
            |:.|...|...|:.|
Zfish   263 AQNLVSDIRAVKANW 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 112/256 (44%)
penumbra_like_LEL 144..267 CDD:239411 50/124 (40%)
tspan17XP_021336653.1 TM4SF9_like_LEL 122..242 CDD:239412 50/124 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.030

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