DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and cd82b

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_997828.1 Gene:cd82b / 324137 ZFINID:ZDB-GENE-030131-2857 Length:256 Species:Danio rerio


Alignment Length:277 Identity:76/277 - (27%)
Similarity:117/277 - (42%) Gaps:67/277 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CV---KYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNI----------- 92
            |:   ||.:||.|.:|::.|.:::|.|::            |||::  ..||.:           
Zfish     5 CIAATKYFLFLFNLLFFILGAVIMGFGLW------------VRLDS--QSFLTVLQESSTSLKVG 55

  Fly    93 SLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQ 157
            :.::|..|::..|:.|.||:||:.|...||..|..||||..:.::..|::.     |....|.|.
Zfish    56 AYILIGIGSLSMLMGFLGCIGAIYEIRCLLGLYFTCLLLILIAQVTAAVLI-----YFQRDLLKG 115

  Fly   158 FTHKIIHSYRDDPDLQNFI----------DFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKC 212
            .|:.|::..     |.|:.          |:.|:..||||.  ||..||.:|.....:|.     
Zfish   116 ETYNIVNKI-----LVNYTGSNNTSEDAWDYIQRTMKCCGW--SGQSDWKENVMIKNNSK----- 168

  Fly   213 GVPYSCCINATDISSGLVNIMCGYGVQNAPVPEATKLIW---TSGCIEIVRVWAEHNLYVIAGNA 274
             :.|.|......||        |...|.....|.....|   |.|||..:..|...|..||.|..
Zfish   169 -ILYPCSCRNESIS--------GSDKQEKGFCEGLSPQWPVFTKGCISSLEDWILRNCGVILGVC 224

  Fly   275 LGIALIQLLVIYLAKTL 291
            :|||:|:||.:.|:..|
Zfish   225 VGIAVIELLGMILSMCL 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 42/167 (25%)
penumbra_like_LEL 144..267 CDD:239411 32/135 (24%)
cd82bNP_997828.1 Tetraspanin 24..243 CDD:459767 69/258 (27%)
CD37_CD82_like_LEL 106..218 CDD:239413 33/137 (24%)

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