DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp3A and Tsp5D

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster


Alignment Length:290 Identity:73/290 - (25%)
Similarity:110/290 - (37%) Gaps:73/290 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GGRGYSGIEVHEVMHPHHFTYVSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRL 82
            |..||:                  |::.....||.:.||.....||.|::            :||
  Fly     2 GNAGYT------------------CIRRTFCWLNIILWLCSCAFLGAGLW------------LRL 36

  Fly    83 ENFYDVFLNI----------SLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEM 137
            .  |..:..:          ::.|.:.||. |:|||.||.||..::..||..|.|.:::.|:.|.
  Fly    37 S--YAGYATLLPQHAGLSADTIFMGIGGTG-FVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEF 98

  Fly   138 AIAIVCFVCPQYMNTFLEKQFTHKIIHSYRDD-------PDLQNFIDFAQQEFKCCGLSNSGYQD 195
            .:..:.|:....:...|..:....|...|...       |.:.:..|..||.|:|||:|:  |:|
  Fly    99 LVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGSLVAPSVASIWDSVQQSFECCGVSS--YED 161

  Fly   196 WSKNEYFNCSSPSVEKCGVPYSCCINATD--------ISSGLVNIMCGYGVQNAPVPEATKLIWT 252
            |    |...|.|.  :..||.|||....|        ...|::...||..       |...|.|.
  Fly   162 W----YDIQSWPG--RRWVPESCCRTLYDQRQVLTEGSGDGMMRPDCGRS-------ENPSLWWD 213

  Fly   253 SGCIEIVRVWAEHNLYVIAGNALGIALIQL 282
            .||...::.|....|.|:....||||.:||
  Fly   214 KGCAHSLQSWFTGQLNVVGAVGLGIAFVQL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 70/266 (26%)
penumbra_like_LEL 144..267 CDD:239411 34/137 (25%)
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 70/266 (26%)
NET-5_like_LEL 105..228 CDD:239418 34/137 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.