DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tspan9

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001101360.1 Gene:Tspan9 / 312728 RGDID:1304740 Length:330 Species:Rattus norvegicus


Alignment Length:313 Identity:88/313 - (28%)
Similarity:145/313 - (46%) Gaps:76/313 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GMAGGRGYS----GIEVHEVMHPHHFTYV-----------------------SQCVKYMIFLLNF 52
            |.||.||.|    ||:..:...|....||                       ..|:|||:||.|.
  Rat    45 GTAGSRGQSRTEAGIKTDKYNAPKGSKYVVFYLDLSFVFLLEFKKCNMARGCLCCLKYMMFLFNL 109

  Fly    53 VFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDV-----FLNISLVMILAGTVIFLVSFSGCV 112
            :|||.|..|||:|::.          ||...||...     .|:.:.::|..||::.:..|.||:
  Rat   110 IFWLCGCGLLGVGIWL----------SVSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCL 164

  Fly   113 GALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLE--KQFTHK--IIHSYRDDPDLQ 173
            ||::||..||..:.:.||:..|.|:.:.|:.||   ||:...|  ||...:  ::::..::..|:
  Rat   165 GAIKENKCLLLSFFIVLLIILLAELILLILFFV---YMDKVNENAKQDLKEGLLLYNTENNVGLK 226

  Fly   174 NFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGLVNIMCGYGV 238
            |..:..|.|.:|||:::  |.||         .|.:.:..||..||:   :.|.|     ||   
  Rat   227 NAWNIIQAEMRCCGVTD--YTDW---------YPVLGENTVPDRCCM---ENSQG-----CG--- 269

  Fly   239 QNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTL 291
            :|:..|     :|.:||.|.|::|.:.|.:|:....:...::|:|.:..:.||
  Rat   270 RNSTTP-----LWKTGCYEKVKLWFDDNKHVLGTVGMCFLIMQILGMAFSMTL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 48/152 (32%)
penumbra_like_LEL 144..267 CDD:239411 34/126 (27%)
Tspan9NP_001101360.1 Tetraspanin 100..319 CDD:459767 76/258 (29%)
NET-5_like_LEL 196..293 CDD:239418 34/126 (27%)

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