Protein Alignment Tsp3A and Tspan17

DIOPT Version :10

• Sequence 1: NP_525054.2
• Gene: Tsp3A / 31244
• FlyBaseID: FBgn0040334
• Length: 304
• Species: Drosophila melanogaster
• Sequence 2: XP_006253692.1
• Gene: Tspan17 / 306771
• RGDID: 1311167
• Length: 281
• Species: Rattus norvegicus
• Alignment Length: 268
• Identity: 110/268 - (41%)
• Similarity: 158/268 - (58%)
• Gaps: 14/268 - (5%)

  Fly    39 VSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDK--WEDANGSVRLENFYDVFLNISLVMILAGT 101
            |..|.||.:|..|.|||:.|.|.|.||::|:.:|  ..:.:|...|.....|:|     .::.|.
  Rat    13 VGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISGLTDLGGLDPVWL-----FVVIGG 72

  Fly   102 VIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHSY 166
            ::.::.|:||:||||||||||||:|:.|.|.|.||:|..|:.||...::...| ..|.:..:.:|
  Rat    73 IMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQL-NLFINNNVKAY 136

  Fly   167 RDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCS--SPSVEKCGVPYSCCINATDISSGL 229
            |||.||||.|||||:.:.|||.  .|..||:.|.||||:  :||.|:||||:|||:.  |.:..:
  Rat   137 RDDIDLQNLIDFAQEYWSCCGA--RGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVR--DPAEDV 197

  Fly   230 VNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEGQ 294
            :|..|||.::.....|....|:|.||:.....|.:.||.|:||..:.|||:|:..|.||:.|...
  Rat   198 LNTQCGYDIRLKLELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVAIALLQICGICLAQNLVSD 262

  Fly   295 IELQKSRW 302
            ||..|:.|
  Rat   263 IEAVKANW 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp3A	NP_525054.2	Tetraspanin	43..>187	CDD:459767	60/145 (41%)
		penumbra_like_LEL	144..267	CDD:239411	49/124 (40%)
Tspan17	XP_006253692.1	Tetraspanin	18..260	CDD:459767	103/251 (41%)
		TM4SF9_like_LEL	115..235	CDD:239412	49/124 (40%)