Protein Alignment Tsp3A and Upk1b

DIOPT Version :10

• Sequence 1: NP_525054.2
• Gene: Tsp3A / 31244
• FlyBaseID: FBgn0040334
• Length: 304
• Species: Drosophila melanogaster
• Sequence 2: NP_001019424.1
• Gene: Upk1b / 303924
• RGDID: 1307806
• Length: 260
• Species: Rattus norvegicus
• Alignment Length: 210
• Identity: 43/210 - (20%)
• Similarity: 81/210 - (38%)
• Gaps: 38/210 - (18%)

  Fly    87 DVFLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMN 151
            |:| ..:.:.:..|..:|.:|....||.::.|..:|..|.:.:.:.:..|:|   .|.......:
  Rat    54 DIF-GAAWIGMFVGICLFCLSVLAIVGIMKSNRKILLAYFIMMFIVYGFEVA---SCITAATQRD 114

  Fly   152 TFLEKQFTHKIIHSYR-------DDPDLQNFI----DFAQQEFKCCGLSNSGYQDWSKNEYFNCS 205
            .|....|..:::..|:       ||....:::    |....:..|||:  :|..||.|    ..|
  Rat   115 FFTTNLFLKQMLMRYQNNSPPTNDDKWKNSYVTKTWDRLMLQDHCCGV--NGPSDWQK----YTS 173

  Fly   206 SPSVEKCGVPY----SCCINATDISSGLVNI-MCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEH 265
            :..||.....|    .||:  .|.....:|: .|..||..        ...:.||.|::....:.
  Rat   174 AFRVENSDADYPWPRQCCV--MDKLQEPLNLDACKLGVPG--------YYHSQGCYELISGPMDR 228

  Fly   266 NLYVIAGNALGIALI 280
            :.:.:|.  .|.|::
  Rat   229 HAWGVAW--FGFAIL 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp3A	NP_525054.2	Tetraspanin	43..>187	CDD:459767	20/110 (18%)
		penumbra_like_LEL	144..267	CDD:239411	27/138 (20%)
Upk1b	NP_001019424.1	Tetraspanin	14..>161	CDD:459767	20/110 (18%)
		uroplakin_I_like_LEL	120..230	CDD:239409	26/125 (21%)