Protein Alignment Tsp3A and Tspan1

DIOPT Version :10

• Sequence 1: NP_525054.2
• Gene: Tsp3A / 31244
• FlyBaseID: FBgn0040334
• Length: 304
• Species: Drosophila melanogaster
• Sequence 2: NP_001004236.1
• Gene: Tspan1 / 298436
• RGDID: 1303308
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 266
• Identity: 73/266 - (27%)
• Similarity: 116/266 - (43%)
• Gaps: 46/266 - (17%)

  Fly    41 QC---VKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDV------FLNISLVM 96
            ||   :|.|:.|.|.:.:|.|..||.:|:      |...:|:..|:.|..:      |:|:...:
  Rat     2 QCFKFIKVMMILFNLLIFLCGAALLAVGI------WVSVDGTSFLKAFGSLSSSAMQFVNVGYFL 60

  Fly    97 ILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHK 161
            |.||.|:|::.|.||.||..||..:|..:...||:.|:.|:|.|:|..|    ..|..|:..|..
  Rat    61 IAAGAVLFILGFLGCYGAHSENKCVLMMFFSILLIIFIAEIAGAVVALV----YTTMAEQFLTFL 121

  Fly   162 IIHSYRDDPDLQNFIDFAQ------QEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCI 220
            ::.:...|...|.  :|.|      :...|||.:|  |.|      ||.|....|....|..||.
  Rat   122 VVPAIEKDYGYQT--EFTQVWNSTMEGLHCCGFNN--YTD------FNSSRFVKENKVFPPFCCA 176

  Fly   221 NATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVI 285
            |.||          .:.|:.....:| |.:...||.:.:......|...:.|.|:|:|.::|..:
  Rat   177 NNTD----------SHTVEPCTEDKA-KSMNVQGCFKQILQKIRTNAVTVGGVAVGVAALELAAM 230

  Fly   286 YLAKTL 291
            .::..|
  Rat   231 VVSMYL 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp3A	NP_525054.2	Tetraspanin	43..>187	CDD:459767	44/155 (28%)
		penumbra_like_LEL	144..267	CDD:239411	29/128 (23%)
Tspan1	NP_001004236.1	Tetraspanin	7..>151	CDD:459767	44/155 (28%)
		uroplakin_I_like_LEL	106..211	CDD:239409	30/129 (23%)