DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp3A and TSPAN13

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_055214.1 Gene:TSPAN13 / 27075 HGNCID:21643 Length:204 Species:Homo sapiens


Alignment Length:254 Identity:55/254 - (21%)
Similarity:91/254 - (35%) Gaps:69/254 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILAGTVIFLV 106
            |.|..:..||.::.|...||:||..      |....|.:.       .|.:..|:|..|..:||:
Human     8 CSKNCLCALNLLYTLVSLLLIGIAA------WGIGFGLIS-------SLRVVGVVIAVGIFLFLI 59

  Fly   107 SFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQ-YMNTFLEKQFTHKIIHSYRDDP 170
            :..|.:||::.:..||.||.:.|||.|:::.:::..|....| .....||..:.:..  |.|:| 
Human    60 ALVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNQEQQGQLLEVGWNNTA--SARND- 121

  Fly   171 DLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGLVNIMCG 235
                    .|:...|||..       |.|....|.:..|:.   .:||                 
Human   122 --------IQRNLNCCGFR-------SVNPNDTCLASCVKS---DHSC----------------- 151

  Fly   236 YGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEGQ 294
                             |.|..|:..:|...|..:.|..|..:..::|.::|......|
Human   152 -----------------SPCAPIIGEYAGEVLRFVGGIGLFFSFTEILGVWLTYRYRNQ 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 36/144 (25%)
penumbra_like_LEL 144..267 CDD:239411 20/123 (16%)
TSPAN13NP_055214.1 Tetraspanin <55..190 CDD:459767 39/189 (21%)

Return to query results.
Submit another query.