DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tspan12

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_766595.1 Gene:Tspan12 / 269831 MGIID:1889818 Length:305 Species:Mus musculus


Alignment Length:266 Identity:61/266 - (22%)
Similarity:106/266 - (39%) Gaps:44/266 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDA---NGSVRLEN--FYDVFLNISLVMILAG 100
            :|::.:::.||.:|||....:|.:..: .||...:.   ....|:|.  ....|..:..|||...
Mouse     8 KCLRCLLYALNLLFWLMSISVLAVSAW-MRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVC 71

  Fly   101 TVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCF-----VCPQYMN-TFLEKQFT 159
            ..:.:|...|..|.::.|..||.:|...||:.|.:|:|..:..:     |..|:.: ..|:.:.|
Mouse    72 CFLIIVGMLGYCGTVKRNLLLLAWYFGTLLVIFCVELACGVWTYEQEVMVPVQWSDMVTLKARMT 136

  Fly   160 HKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATD 224
            :..:..||   .|.:..::.|:||||||:..  :.||.:         ..|....|.|||:....
Mouse   137 NYGLPRYR---WLTHAWNYFQREFKCCGVVY--FTDWLE---------MTEMDWPPDSCCVREFP 187

  Fly   225 ISSGLVNIMCGYGVQNAPVPEATKLIWTSGC----IEIVRVWAEHNLYVIAGNALGIALIQLLVI 285
                        |.......|....::..||    ...:|  ....|.|:....:.|.:.|:|.:
Mouse   188 ------------GCSKQAHQEDLSDLYQEGCGKKMYSFLR--GTKQLQVLRFLGISIGVTQILAM 238

  Fly   286 YLAKTL 291
            .|..||
Mouse   239 ILTITL 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 38/154 (25%)
penumbra_like_LEL 144..267 CDD:239411 26/132 (20%)
Tspan12NP_766595.1 Tetraspanin 10..246 CDD:459767 60/264 (23%)
TM4SF12_like_LEL 116..218 CDD:239410 26/129 (20%)

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