DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Cd9

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_063141640.1 Gene:Cd9 / 24936 RGDID:2318 Length:249 Species:Rattus norvegicus


Alignment Length:278 Identity:62/278 - (22%)
Similarity:116/278 - (41%) Gaps:63/278 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSV-RLENFYDVFLNISLVMILAGTVI 103
            |:|:||::|..||:|||.|..:|.||::.   :::....|: ..|..:..|.....::|.||.::
  Rat     7 SKCIKYLLFGFNFIFWLAGIAVLAIGLWL---RFDSQTKSIFEQETNHSSFYTGVYILIGAGALM 68

  Fly   104 FLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHSYRD 168
            .||.|.||.||::|:..:|..:...||:.|.:|:|.|:              ..:|||      |
  Rat    69 MLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAV--------------WGYTHK------D 113

  Fly   169 D--PDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGL-- 229
            :  .:||.|.....|:.:        .:|..:.|.......::..||           |:.|:  
  Rat   114 EVIKELQEFYKDTYQKLR--------NKDEPQRETLKAIHMALNCCG-----------IAGGVEQ 159

  Fly   230 -VNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQL--------LVI 285
             ::.:|       |..:..:......|.:.:........::|....:|||::.:        .::
  Rat   160 FISDIC-------PKKQVLESFQVKSCPDAIDEVFHSKFHIIGAVGIGIAVVMVSGRWSRGKTLV 217

  Fly   286 YLAKTLEGQIELQKSRWL 303
            ..|:.|...:..||..||
  Rat   218 SCAQALLEVLSGQKHSWL 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 41/146 (28%)
penumbra_like_LEL 144..267 CDD:239411 17/127 (13%)
Cd9XP_063141640.1 None

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