DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tsp-11

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_509546.4 Gene:tsp-11 / 192064 WormBaseID:WBGene00006637 Length:287 Species:Caenorhabditis elegans


Alignment Length:216 Identity:51/216 - (23%)
Similarity:90/216 - (41%) Gaps:50/216 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDAN---GSVRLENFYD-------------V 88
            ::.:|:.:|:.|.||.|.|.:.||||::...||:...|   .:.:::. ||             .
 Worm    15 ARALKFSLFIFNLVFLLCGLICLGIGLWLVLDKYAIDNLAFATAKVQG-YDQDAGLRDLATKPTA 78

  Fly    89 FLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFV-CPQYMNT 152
            ......::.:.|.::.:|:|.||.||.:|...||..||.||:|...:::|..|..|: ...:.|.
 Worm    79 VRQFGYLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAFLHSHMFEND 143

  Fly   153 FLEKQFTHKIIHSYR--------DDPD----LQNFIDFAQQEFKCCGL-------SNSGYQDWSK 198
            |  :...|..:..|.        ::|.    ::...|....|..|||:       :|||:...:.
 Worm   144 F--RDILHSSLKMYNGTDNMKVSNNPQDGLLVKTAWDKIMIEKSCCGVDSKIGEFNNSGWYQLNH 206

  Fly   199 NEYFNCSSPSVEKCGVPYSCC 219
            ..|           ..|.:||
 Worm   207 GRY-----------QFPPACC 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 42/172 (24%)
penumbra_like_LEL 144..267 CDD:239411 18/96 (19%)
tsp-11NP_509546.4 Tetraspanin 18..278 CDD:459767 51/213 (24%)

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