DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tsp-9

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:265 Identity:60/265 - (22%)
Similarity:102/265 - (38%) Gaps:76/265 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENF-----------------YD 87
            :.|:|.:.|::||...:||.|:.|..::|..||    |....|.:|                 |.
 Worm     5 NSCIKLLFFVINFFICIFGALICGFSLWANLDK----NFGSHLSDFVRQIEGIDQKLVNEIAEYQ 65

  Fly    88 VFLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNT 152
            ..|   .:::..|.::|||.|.||.||..|:..||..:...:::...:|:...:......:...:
 Worm    66 ASL---WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVS 127

  Fly   153 FLEKQFTHKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYS 217
            .:: |...|...:|    :|:..|...|..|:|||.:..     ::|.|                
 Worm   128 SIQ-QVLKKSSATY----ELRKNIKPIQNVFQCCGATAQ-----TQNRY---------------- 166

  Fly   218 CCINATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIE----IVRVWAEHNLYVIAGNALGIA 278
                   |..||    ||....:|||          .|.:    :|:.|.| ::.|:|...|.|.
 Worm   167 -------IQDGL----CGPEPLSAPV----------NCFDRISHMVQSWGE-SIVVVAFLLLAIE 209

  Fly   279 LIQLL 283
            |..:|
 Worm   210 LFAIL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 37/160 (23%)
penumbra_like_LEL 144..267 CDD:239411 24/126 (19%)
tsp-9NP_508232.1 Tetraspanin 8..221 CDD:459767 59/262 (23%)

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