DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and LOC1274940

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_314136.5 Gene:LOC1274940 / 1274940 VectorBaseID:AGAMI1_014205 Length:249 Species:Anopheles gambiae


Alignment Length:259 Identity:71/259 - (27%)
Similarity:113/259 - (43%) Gaps:39/259 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISL-----VMILAGTV 102
            :||::|:.|.:|.:.|.:||..|:....|           .|.|..|:...|     |:|:.|::
Mosquito    21 IKYLLFVFNLIFAISGLILLVAGIVVLVD-----------VNDYQHFVQDRLMAPPVVLIVVGSL 74

  Fly   103 IFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHSYR 167
            :|||:..||.||::|:..||..:::.||:.||:|:|:||........:...|.||....|.....
Mosquito    75 VFLVASLGCYGAIKESPKLLNAFAVFLLIVFLIEIAVAIAAIAFKADLQDALRKQLDKSIARHNN 139

  Fly   168 DDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGLVNI 232
            .|....|.:   .:...|||:  .|.:||    |.|.:..      :|.|||  ..|:.....| 
Mosquito   140 ADMAAWNSV---HRNMMCCGI--QGPKDW----YDNLNRT------MPASCC--KPDLIEPETN- 186

  Fly   233 MCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEGQIE 296
                ..:||| |......:..||:..:......|..|:......||:.|||.::.|..|...|:
Mosquito   187 ----DCKNAP-PLFMDRYYQDGCLMKLEDHFHKNAVVLIAVGFAIAIFQLLGVFFACWLSSSIK 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 42/148 (28%)
penumbra_like_LEL 144..267 CDD:239411 26/122 (21%)
LOC1274940XP_314136.5 None

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