DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Cd81

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_598416.1 Gene:Cd81 / 12520 MGIID:1096398 Length:236 Species:Mus musculus


Alignment Length:262 Identity:66/262 - (25%)
Similarity:113/262 - (43%) Gaps:52/262 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLEN------FYDVFLNISLVMIL 98
            ::|:||::|:.||||||.||::||:.::...|....:...:.|.|      ||   :.| .::|.
Mouse     7 TKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTSLLYLELGNKPAPNTFY---VGI-YILIA 67

  Fly    99 AGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKII 163
            .|.|:..|.|.||.||::|:..||..:..||::.|..|:|..|..||....:...: |||..:.:
Mouse    68 VGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDV-KQFYDQAL 131

  Fly   164 HSYRDDPDLQN---FIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDI 225
            .....|.|..|   .:....:...||| ||:                              .|.:
Mouse   132 QQAVMDDDANNAKAVVKTFHETLNCCG-SNA------------------------------LTTL 165

  Fly   226 SSGLV-NIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAK 289
            ::.:: |.:|..| .|...|     :....|.:.:.......||:|...|:.:|:|.:..:.|:.
Mouse   166 TTTILRNSLCPSG-GNILTP-----LLQQDCHQKIDELFSGKLYLIGIAAIVVAVIMIFEMILSM 224

  Fly   290 TL 291
            .|
Mouse   225 VL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 46/152 (30%)
penumbra_like_LEL 144..267 CDD:239411 20/126 (16%)
Cd81NP_598416.1 Tetraspanin 10..228 CDD:459767 65/259 (25%)

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