DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tsp68C

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster


Alignment Length:288 Identity:65/288 - (22%)
Similarity:106/288 - (36%) Gaps:71/288 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 FTYVSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWED------ANGSVRLEN------FYDV 88
            |.|     |:::.|.||:|.:.|.||:..|:|.|.|....      |..|.||.:      ||  
  Fly     5 FNY-----KFVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFY-- 62

  Fly    89 FLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTF 153
               |:|.:.:||.|..|.:..|...:.......|..|.:.:::..|.|..:.:...:.|..:...
  Fly    63 ---IALGVAIAGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGIS 124

  Fly   154 LEKQFTHKIIHSYRDDPDLQNF---IDFAQQEFKCCGLSNSGYQD---WSKNEYFNCSSPSVEKC 212
            |::....:.:.|....|..:.|   :|.||..|.|||:.:|...|   |....|...:.|     
  Fly   125 LDETQMVRSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNWP----- 184

  Fly   213 GVPYSCCINATDISSGLVNIMCGYGVQNA--------PVPEATKLI------------WTSGCIE 257
             ||.|||.                 ::||        |.|....:.            .|..|:.
  Fly   185 -VPLSCCF-----------------LKNAGHSMAYLDPKPANESMCQSLERLSYERERHTESCLP 231

  Fly   258 IVRVWAEHNLYVIAGNALGIALIQLLVI 285
            .:..|......:..|.:|.:|:|:..|:
  Fly   232 HLDNWYREQYSIFLGASLILAMIEFCVL 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 39/158 (25%)
penumbra_like_LEL 144..267 CDD:239411 29/148 (20%)
Tsp68CNP_729926.1 Tetraspanin 8..>161 CDD:459767 39/157 (25%)
tetraspanin_LEL 117..241 CDD:239401 29/146 (20%)

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