DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and LOC101730599

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_017947977.1 Gene:LOC101730599 / 101730599 -ID:- Length:311 Species:Xenopus tropicalis


Alignment Length:266 Identity:88/266 - (33%)
Similarity:135/266 - (50%) Gaps:37/266 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MHPHHFTYVSQCVKYMIFLLNFVFWLFGGLLLGIGVYA--FRDKWEDANGSVRLENFYDVFLNIS 93
            :.|::::      |:.:...:.:|.|.|.::|.||:||  .|.|.....|         :||..:
 Frog    11 LRPYYYS------KFSLSFYSTLFSLIGLVILCIGIYAESERQKHRTLEG---------IFLAPA 60

  Fly    94 LVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQF 158
            ::::|.|.::|.|||.|.||:||:|..|:|.:...||..||:|:.:.|:..|....|     |:|
 Frog    61 VILLLLGIIMFAVSFIGMVGSLRDNILLVKLFFWVLLAIFLIELLLIIIELVFENQM-----KKF 120

  Fly   159 THKII----HSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCC 219
            .|..|    ..|.||.|.:|.:||.|::|.|||  ...::||..|:|.:|:|.....|||||:||
 Frog   121 AHANILVGMQQYYDDLDFKNIMDFVQEKFSCCG--GDDFKDWKVNQYHSCNSTGPLACGVPYTCC 183

  Fly   220 INATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHN--------LYVIAGNALG 276
            |...: |.|:.|.:|||...:....|...:|...|||..|.:|...|        |.::|...||
 Frog   184 ITGKE-SGGVKNTLCGYQTLDKERLEVHSIIHVRGCIHAVGLWLGDNYGVTIGLVLALLAPQGLG 247

  Fly   277 IALIQL 282
            |.|..|
 Frog   248 IGLSYL 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 87/255 (34%)
penumbra_like_LEL 144..267 CDD:239411 46/134 (34%)
LOC101730599XP_017947977.1 penumbra_like_LEL 112..230 CDD:239411 45/125 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1416189at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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