DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and LOC100492058

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_002934422.3 Gene:LOC100492058 / 100492058 -ID:- Length:300 Species:Xenopus tropicalis


Alignment Length:266 Identity:96/266 - (36%)
Similarity:156/266 - (58%) Gaps:19/266 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILAGTVIF 104
            :|.|||.:|:..::||:..||::.:|:||...|......|:..:.        ::::...|.::|
 Frog     4 NQIVKYSLFVSCYLFWVASGLMIAVGIYAKFCKETTIVDSLTTDP--------AVIVTAVGILMF 60

  Fly   105 LVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEK--QFTHKIIHSYR 167
            .::|.||:||||:...|||.::..||:..:|:...|::.|:   :....|||  ....:.|:.||
 Frog    61 AITFVGCMGALRDLHILLKIFAWMLLIVLILQFVAAVLGFM---FSGMVLEKVSSVMTRAINRYR 122

  Fly   168 DDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNC--SSPSVEKCGVPYSCCINATDISSGLV 230
            :|.|||||||:.|::|:|||::|  |:|||:|.||.|  |:||:|||||||||||.  :....::
 Frog   123 EDLDLQNFIDYLQKKFECCGVNN--YRDWSQNLYFYCSESNPSLEKCGVPYSCCIK--ENGQKVI 183

  Fly   231 NIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEGQI 295
            |.||||..||....:...:|:..||::.:..|...||.::.|.|:|:..:::.|..||..|..||
 Frog   184 NTMCGYQTQNRMQWDVDDMIYVEGCLDKIVSWGRGNLLLLGGLAMGLIFLEIFVASLAIILIYQI 248

  Fly   296 ELQKSR 301
            .....|
 Frog   249 NFIMER 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 92/256 (36%)
penumbra_like_LEL 144..267 CDD:239411 54/126 (43%)
LOC100492058XP_002934422.3 Tetraspannin 7..244 CDD:366035 91/251 (36%)
penumbra_like_LEL 100..215 CDD:239411 53/121 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1416189at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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