DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3g1 and NOP4

DIOPT Version :10

Sequence 1:NP_570011.1 Gene:eIF3g1 / 31243 FlyBaseID:FBgn0029629 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_015282.1 Gene:NOP4 / 856063 SGDID:S000005964 Length:685 Species:Saccharomyces cerevisiae


Alignment Length:317 Identity:63/317 - (19%)
Similarity:103/317 - (32%) Gaps:112/317 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KDDKKTKV--VRTYKISKQVVPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED 105
            :||.|..:  .|..|.:..::...:||||..:|......:|..|.|     ||:|..|....::|
Yeast    76 EDDTKEALAKARKTKFNGHILRVDIAKRRDRSKKTSEVVEKSTPES-----SEKITGQNNEDEDD 135

  Fly   106 EKANDPLLDPTKNIAKCRICNGEHWSVNCPYK--------GTAMDTNM---------------ME 147
            ....|.:|.....:    |.....||...|.|        ||.::..:               |:
Yeast   136 ADGEDSMLKGKPKL----IIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLCGFAFVTMK 196

  Fly   148 KKASAAAA-------------AAVD-APKSGKYVPPFLKDSQKGALGMRGRDDTA---------- 188
            |.::...|             .||| |.:..::     :|.:|....|..:||..          
Yeast   197 KISNCRIALENTKDLKIDGRKVAVDFAVQKNRW-----EDYKKAQPEMNDKDDNESGNEDAEENH 256

  Fly   189 ----------------------------------AIRISNLSESMTEADLEELVKKIGPQSKMYL 219
                                              ::.:.|:....||..|.....|.|.......
Yeast   257 DDEEDENEEEDRQVDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAPHFSKFGSVKYALP 321

  Fly   220 ARDKNTGLCKGFAYVHFKQR-------KDAAAA--------IEILNGHGYDHLILSV 261
            ..||:|||.||.|:|.||.:       |:|.||        .:::..:.|:..:||:
Yeast   322 VIDKSTGLAKGTAFVAFKDQYTYNECIKNAPAAGSTSLLIGDDVMPEYVYEGRVLSI 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3g1NP_570011.1 eIF3g 23..140 CDD:463545 26/106 (25%)
RRM_eIF3G_like 190..264 CDD:409842 24/87 (28%)
NOP4NP_015282.1 RRM1_Nop4p 26..104 CDD:410075 7/27 (26%)
RRM2_Nop4p 147..229 CDD:410076 14/85 (16%)
RRM3_Nop4p 289..387 CDD:410077 24/90 (27%)
RRM4_Nop4p 458..620 CDD:410078
Blue background indicates that the domain is not in the aligned region.

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