DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3g1 and NPL3

DIOPT Version :9

Sequence 1:NP_570011.1 Gene:eIF3g1 / 31243 FlyBaseID:FBgn0029629 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_010720.3 Gene:NPL3 / 852042 SGDID:S000002840 Length:414 Species:Saccharomyces cerevisiae


Alignment Length:108 Identity:28/108 - (25%)
Similarity:49/108 - (45%) Gaps:18/108 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 PKSGKYV---PPFLKDSQKGALGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARD 222
            |..|:::   || :...|:|.|      ....:.:......:.|::|.|:....||.        
Yeast   102 PPPGEHMHGRPP-MHHRQEGEL------SNTRLFVRPFPLDVQESELNEIFGPFGPM-------- 151

  Fly   223 KNTGLCKGFAYVHFKQRKDAAAAIEILNGHGYDHLILSVEWSK 265
            |...:..|||:|.|::.:.||.|||.::|..:.:..|.|.:||
Yeast   152 KEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYSK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3g1NP_570011.1 eIF3g 30..140 CDD:289149
RRM <161..>269 CDD:223796 28/108 (26%)
RRM_eIF3G_like 189..265 CDD:240854 19/75 (25%)
NPL3NP_010720.3 PHA03247 <11..87 CDD:223021
RBD_RRM1_NPL3 126..192 CDD:409777 19/73 (26%)
RRM2_SRSF1_4_like 200..271 CDD:409776
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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