DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment eIF3g1 and AT5G09880

DIOPT Version :9

Sequence 1:	NP_570011.1	Gene:	eIF3g1 / 31243	FlyBaseID:	FBgn0029629	Length:	269	Species:	Drosophila melanogaster
Sequence 2:	NP_568220.1	Gene:	AT5G09880 / 830848	AraportID:	AT5G09880	Length:	527	Species:	Arabidopsis thaliana

Alignment Length:	280	Identity:	62/280 - (22%)
Similarity:	98/280 - (35%)	Gaps:	76/280 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 ENG----QKYVTEYKYNKD-DKKTKVVRTYKISKQVVPKTVAKRRTWTKFGDSKNDKP------- 82
            |||    .:....::.::| |::...||.....|:...:..:|.|     ..|..|||
plant    67 ENGGGKRDRERERHRSSRDKDRERDKVREGSRDKESDRERSSKER-----DRSDRDKPRDRERRE 126

  Fly    83 -----GPNSQTTMVSEEIIMQFLNSKEDEKANDPLLDPTKNIAKCRICNGEHWSVNCPYKGT--- 139
                 ...|:......|::.:......|:| ::|..||.::       ....::...|.|.|
plant   127 REKRSSSRSRREEKEPEVVERGSRRHRDKK-DEPEADPERD-------QRTVFAYQMPLKATERD 183

  Fly   140 ----------------AMDTNMMEKKA----------SAAAAAAVDAPKSGK-------YVPPF- 170
                            .||.|....|.          |...|.|:    ||:       .|.|.
plant   184 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL----SGQLFLGQPVMVKPSE 244

  Fly   171 ----LKDSQKGALGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGF 231
                |..|....:|..|..| ..:.:.||..:|:|..|.::.:..||...:.|..|..||.||||
plant   245 AEKNLAQSNSTTVGGTGPAD-RKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGF 308

  Fly   232 AYVHFKQRKDAAAAIEILNG 251
            .::.|.|.:.:.||...|||
plant   309 GFIQFVQLEHSKAAQIALNG 328

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
eIF3g1	NP_570011.1	eIF3g	30..140	CDD:289149	24/145 (17%)
		RRM	<161..>269	CDD:223796	31/103 (30%)
		RRM_eIF3G_like	189..265	CDD:240854	22/63 (35%)
AT5G09880	NP_568220.1	SF-CC1	85..517	CDD:273721	59/262 (23%)
		RRM1_RBM39_like	169..241	CDD:240729	12/75 (16%)
		RRM2_RBM23_RBM39	267..340	CDD:240730	22/62 (35%)
		RBM39linker	366..452	CDD:292157
		RRM3_RBM39_like	434..517	CDD:240731
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910