DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3g1 and AT2G43370

DIOPT Version :10

Sequence 1:NP_570011.1 Gene:eIF3g1 / 31243 FlyBaseID:FBgn0029629 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_850395.1 Gene:AT2G43370 / 818938 AraportID:AT2G43370 Length:333 Species:Arabidopsis thaliana


Alignment Length:105 Identity:28/105 - (26%)
Similarity:48/105 - (45%) Gaps:8/105 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 SGKYVPPFLKDSQKGALGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGL 227
            :|.|.|.  .||:  |:|    |....:.:..||...||..|.|::.|.|....:.|.|...||.
plant    47 AGLYDPS--GDSK--AVG----DPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGA 103

  Fly   228 CKGFAYVHFKQRKDAAAAIEILNGHGYDHLILSVEWSKPQ 267
            .:|:.:|.::..|:...|.|..:....|...:.|::::.|
plant   104 SRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQ 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3g1NP_570011.1 eIF3g 23..140 CDD:463545
RRM_eIF3G_like 190..264 CDD:409842 19/73 (26%)
AT2G43370NP_850395.1 RRM_snRNP35 60..150 CDD:409683 22/88 (25%)
U2AF_lg 218..>324 CDD:273727
Blue background indicates that the domain is not in the aligned region.

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