DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3g1 and nifk

DIOPT Version :10

Sequence 1:NP_570011.1 Gene:eIF3g1 / 31243 FlyBaseID:FBgn0029629 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001005639.1 Gene:nifk / 448106 XenbaseID:XB-GENE-940532 Length:276 Species:Xenopus tropicalis


Alignment Length:128 Identity:31/128 - (24%)
Similarity:58/128 - (45%) Gaps:13/128 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 MMEKKASAAAAAAVDAPKSGKYVPPFLKDSQKGALGMRGRDDTAA-----IRISNLSESMTEADL 204
            |.|:...:.:..::|        |...||.|:....:|.:....|     |.|.::..::.|..|
 Frog     1 MAEESVPSGSLLSLD--------PELQKDFQQKVHEIRRKSQVGAVSPGVIYIGHIPRALYEPQL 57

  Fly   205 EELVKKIGPQSKMYLARDKNTGLCKGFAYVHFKQRKDAAAAIEILNGHGYDHLILSVEWSKPQ 267
            .|...:.|..:::.|:|.|.||..||:|||.|:..:.|....:.:|.:.:...:|..|:..|:
 Frog    58 REYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTMNNYLFCERLLKCEFVPPE 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3g1NP_570011.1 eIF3g 23..140 CDD:463545
RRM_eIF3G_like 190..264 CDD:409842 21/73 (29%)
nifkNP_001005639.1 RRM_NIFK_like 42..115 CDD:409748 20/72 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..211
hNIFK_binding 200..251 CDD:463489
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..276
Blue background indicates that the domain is not in the aligned region.

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