DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3g1 and bru3

DIOPT Version :9

Sequence 1:NP_570011.1 Gene:eIF3g1 / 31243 FlyBaseID:FBgn0029629 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001369050.1 Gene:bru3 / 39527 FlyBaseID:FBgn0264001 Length:552 Species:Drosophila melanogaster


Alignment Length:79 Identity:22/79 - (27%)
Similarity:38/79 - (48%) Gaps:4/79 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 ISNLSESMTEADLEELVKKIGP--QSKMYLARDKNTGLCKGFAYVHFKQRKDAAAAIEILNGHGY 254
            |.:|.:...:|:|.::....|.  .||:::.|..|...|  |.:|.|.....|.|||:.:||...
  Fly   327 IYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKC--FGFVSFDNPASAQAAIQAMNGFQI 389

  Fly   255 DHLILSVEWSKPQN 268
            ....|.|:..:|::
  Fly   390 GMKRLKVQLKRPKD 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3g1NP_570011.1 eIF3g 30..140 CDD:289149
RRM <161..>269 CDD:223796 22/79 (28%)
RRM_eIF3G_like 189..265 CDD:240854 21/74 (28%)
bru3NP_001369050.1 RRM2_CELF3_4_5_6 40..120 CDD:410043
ELAV_HUD_SF 43..404 CDD:273741 22/79 (28%)
RRM3_CELF3_4_5_6 319..397 CDD:241083 20/71 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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