DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3g1 and NCBP2L

DIOPT Version :9

Sequence 1:NP_570011.1 Gene:eIF3g1 / 31243 FlyBaseID:FBgn0029629 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001335301.1 Gene:NCBP2L / 392517 HGNCID:31795 Length:153 Species:Homo sapiens


Alignment Length:78 Identity:21/78 - (26%)
Similarity:37/78 - (47%) Gaps:1/78 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 DTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHFKQRKDAAAAIEILN 250
            :::.:.:.|||...||..:.||..:...:: :::..||......||.:|....|.||..|:..|.
Human    37 ESSTLNMGNLSFYTTEEKIHELFSRSDIRN-IFMGLDKIKKTACGFCFVECHNRADAENAMRFLT 100

  Fly   251 GHGYDHLILSVEW 263
            |...|..|:..:|
Human   101 GTCLDEWIICTDW 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3g1NP_570011.1 eIF3g 30..140 CDD:289149
RRM <161..>269 CDD:223796 21/78 (27%)
RRM_eIF3G_like 189..265 CDD:240854 21/75 (28%)
NCBP2LNP_001335301.1 RRM_NCBP2 44..117 CDD:240686 21/71 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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