DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3g1 and LOC110437789

DIOPT Version :9

Sequence 1:NP_570011.1 Gene:eIF3g1 / 31243 FlyBaseID:FBgn0029629 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_021324851.1 Gene:LOC110437789 / 110437789 -ID:- Length:304 Species:Danio rerio


Alignment Length:81 Identity:23/81 - (28%)
Similarity:35/81 - (43%) Gaps:15/81 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 GRD-------------DTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYV 234
            |||             :...:.:|||...:||..|.|....:|..|.:.:.|  |..:...:|:|
Zfish    66 GRDQQPDPVVPTSRFIERKTLLVSNLHPMVTEQQLIEKFGALGSISTVQVCR--NNIISPAYAFV 128

  Fly   235 HFKQRKDAAAAIEILN 250
            .|..|:||..|.:.||
Zfish   129 TFHHRRDAVRAQKALN 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3g1NP_570011.1 eIF3g 30..140 CDD:289149
RRM <161..>269 CDD:223796 23/81 (28%)
RRM_eIF3G_like 189..265 CDD:240854 20/62 (32%)
LOC110437789XP_021324851.1 RRM 19..>144 CDD:330708 21/79 (27%)
RRM_SF 86..157 CDD:327398 20/61 (33%)
Na_Ca_ex <176..>262 CDD:332332
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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