DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3g1 and LOC100490872

DIOPT Version :9

Sequence 1:NP_570011.1 Gene:eIF3g1 / 31243 FlyBaseID:FBgn0029629 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_002932728.2 Gene:LOC100490872 / 100490872 -ID:- Length:449 Species:Xenopus tropicalis


Alignment Length:83 Identity:23/83 - (27%)
Similarity:37/83 - (44%) Gaps:4/83 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 RDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLAR-DKNTGLCKGFAYVHFKQRKDAAAAIE 247
            |.::..:.:.|||   .|.|...|.|:..|...:..|: .:..|..|||.:|.|....:|..|:.
 Frog   132 RYNSVNLYVKNLS---YEIDDYRLNKEFAPFGIITSAKVMREGGRSKGFGFVCFSTPAEARKALS 193

  Fly   248 ILNGHGYDHLILSVEWSK 265
            .:||.......|.|.|::
 Frog   194 GMNGKILASKPLYVAWAQ 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3g1NP_570011.1 eIF3g 30..140 CDD:289149
RRM <161..>269 CDD:223796 23/83 (28%)
RRM_eIF3G_like 189..265 CDD:240854 22/76 (29%)
LOC100490872XP_002932728.2 PABP-1234 <7..431 CDD:130689 23/83 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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