DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3g1 and hnrnpa3

DIOPT Version :10

Sequence 1:NP_570011.1 Gene:eIF3g1 / 31243 FlyBaseID:FBgn0029629 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_031748359.1 Gene:hnrnpa3 / 100144993 XenbaseID:XB-GENE-5878765 Length:385 Species:Xenopus tropicalis


Alignment Length:209 Identity:42/209 - (20%)
Similarity:70/209 - (33%) Gaps:59/209 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 WTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKEDEKANDPLLDPTKNIAKCRICNGEHWS--VN 133
            |....|..::...|        |::...|:.....|..:|.|.:           :.|.|.  .:
 Frog    76 WPSTDDQGHEPKEP--------EQLRKLFIGGLSFETTDDSLRE-----------HFEQWGKLTD 121

  Fly   134 CPY---------KGTAMDTNMMEKKASAAAAA---AVDAPKSGKYVPPFLKDSQKGALGMRGRDD 186
            |..         :|....|....::..||.:|   .||    |:.|.|      |.|:   .|:|
 Frog   122 CVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVD----GRVVEP------KRAV---SRED 173

  Fly   187 TA---------AIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHFKQR--- 239
            :|         .|.:..:.|...|..|.:..:..|....:.:..|:.:|..:|||:|.|...   
 Frog   174 SARPGAHLTVKKIFVGGIKEDTEEYHLRDYFQSYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 238

  Fly   240 -KDAAAAIEILNGH 252
             |........:|||
 Frog   239 DKIVVQKYHTINGH 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3g1NP_570011.1 eIF3g 23..140 CDD:463545 12/79 (15%)
RRM_eIF3G_like 190..264 CDD:409842 16/67 (24%)
hnrnpa3XP_031748359.1 RRM1_hnRNPA_like 94..171 CDD:409992 19/100 (19%)
RRM2_hnRNPA3 184..263 CDD:409996 16/69 (23%)
HnRNPA1 328..>344 CDD:463312
Blue background indicates that the domain is not in the aligned region.

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