DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp3A and Kif2a

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:NP_445828.1 Gene:Kif2a / 84391 RGDID:70974 Length:705 Species:Rattus norvegicus


Alignment Length:514 Identity:152/514 - (29%)
Similarity:241/514 - (46%) Gaps:93/514 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DPSCVAVALRVRPLVQSELD-RGCRIAVERSAD----GAPQVTVN-----RNESYTYNYVFDIDD 59
            |...:.|.:|.|||.:.|.. :...:....|.|    ..|:..|:     .|:::.::|.||...
  Rat   219 DEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDSA 283

  Fly    60 SQKDLFETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDD-HVGVIPRAVHDIFTA 123
            ..:.::....:..|:.:......|..||||||||||:|||..|:|...| ..|:...|..|:|..
  Rat   284 PNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDFSGKNQDCSKGIYALAARDVFLM 348

  Fly   124 IAEMQ-SEFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRIIMPGLTELVVTSAQQVT 187
            :.:.. .:....|..:|.|:|..:.:||.:.||:.:.   :.:.|.::.:.||.|..|...:.|.
  Rat   349 LKKPNYKKLELQVYATFFEIYSGKVFDLLNRKTKLRV---LEDGKQQVQVVGLQEREVKCVEDVL 410

  Fly   188 DHLIRGSAGRAVAATAMNETSSRSHAIFTLTLVAT-KLDGKQSVTTSRFNLVDLAGSERCSKTLA 251
            ..:..|::.|....|:.|..||||||:|.:.|... ||.||       |:|:||||:||.:.| :
  Rat   411 KLIDIGNSCRTSGQTSANAHSSRSHAVFQIILRRKGKLHGK-------FSLIDLAGNERGADT-S 467

  Fly   252 SGDRFK--EGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDS-LGGNSITLMIACVS 313
            |.||..  ||..|||.||||...|.|||..:.  :.|:|.||||::|:|| :|.||.|.|||.:|
  Rat   468 SADRQTRLEGAEINKSLLALKECIRALGRNKP--HTPFRASKLTQVLRDSFIGENSRTCMIATIS 530

  Fly   314 PADYNVAETLSTLRYADRALQIKNKPVVNLDPHAA-EVNML----KDVIQKLRVELLSGGKMSSS 373
            |...:...||:|||||:|..::      .:||.|| :|..:    ...|..|..:.         
  Rat   531 PGMASCENTLNTLRYANRVKEL------TVDPTAAGDVRPIMHHPPSQIDDLETQW--------- 580

  Fly   374 LISAVGAAGLGAIP--------CEES-------LAGSMANAAEIQRLKEQVRTLQDRNRKLQQEL 423
                    |:|:.|        ||::       |.......:::..::|||  ::|.....|:.:
  Rat   581 --------GVGSSPQRDDLKLLCEQNEEEVSPQLFTFHEAVSQMVEMEEQV--VEDHRAVFQESI 635

  Fly   424 -----HQSLLDLTEK----------EMRAHIAEQAHD---KLRSHVSELKNKLDQREQA 464
                 .::||::||:          ::.| |.||..|   :||..|...:..|.:.|||
  Rat   636 RWIEDEKALLEMTEEVDYDVDSYATQLEA-ILEQKIDILTELRDKVKSFRAALQEEEQA 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 117/344 (34%)
Smc <453..>985 CDD:440809 4/12 (33%)
Metallothio <1071..1115 CDD:395080
Kif2aNP_445828.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..185
KISc_KIF2_like 222..550 CDD:276818 117/340 (34%)
Blue background indicates that the domain is not in the aligned region.

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