DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp3A and AT3G12020

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:NP_001189866.1 Gene:AT3G12020 / 820376 AraportID:AT3G12020 Length:1044 Species:Arabidopsis thaliana


Alignment Length:1148 Identity:289/1148 - (25%)
Similarity:461/1148 - (40%) Gaps:345/1148 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVNRNE-----SYTYNYVFDIDDSQKDLFETC 68
            |.|.:|.|||...|:.:|..:|  ..|||.   |:.|||     :|.|:.||....:.:::::..
plant    70 VTVTVRFRPLSPREIRQGEEVA--WYADGE---TIVRNEHNPTIAYAYDRVFGPTTTTRNVYDIA 129

  Fly    69 VQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDH-----VGVIPRAVHDIFTAIAEMQ 128
            ....|...:.|.|.||.|||.|.||||:||          |     .|:||.||.|.|:.|.|..
plant   130 AHHVVNGAMEGINGTIFAYGVTSSGKTHTM----------HGDQRSPGIIPLAVKDAFSIIQETP 184

  Fly   129 SEFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRIIMPGLTELVVTSAQQVTDHLIRG 193
            :. .|.:..|::|:|.|...||.:....:   :.|||.|....:.|:.|.||.|.......:..|
plant   185 NR-EFLLRISYMEIYNEVVNDLLNPAGHN---LRIREDKQGTFVEGIKEEVVLSPAHALSLIAAG 245

  Fly   194 SAGRAVAATAMNETSSRSHAIFTLTLVATKLDGK---QSVTTSRFNLVDLAGSERCSKTLASGDR 255
            ...|.|.:|..|..|||||.|||||:.::.|..|   ::|..|:.||||||||| .||...||.|
plant   246 EEQRHVGSTNFNLLSSRSHTIFTLTIESSPLGDKSKGEAVHLSQLNLVDLAGSE-SSKVETSGVR 309

  Fly   256 FKEGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVA 320
            .|||..|||.||.||.||:.| :...|.::|||.|||||:||.||.|:....:|..|:||..:..
plant   310 RKEGSYINKSLLTLGTVISKL-TDVRASHVPYRDSKLTRILQSSLSGHDRVSLICTVTPASSSSE 373

  Fly   321 ETLSTLRYADRA----LQIKNKPVVN----LDPHAAEVNMLKDVIQKLRVELLSGGKMSSSLISA 377
            ||.:||::|.||    :|.:...:::    :..:..|:..||:.:::|:.|::            
plant   374 ETHNTLKFAHRAKHIEIQAEQNKIIDEKSLIKKYQREIRQLKEELEQLKQEIV------------ 426

  Fly   378 VGAAGLGAIPCEESLAGSMANAAEIQRLKEQVRTLQDRNRKLQQELHQSLLDLTEKEMRAHIAE- 441
                   .:|..:.:     .|.:|..||::   |:|...|||..|.:      |:|.:|.:.. 
plant   427 -------PVPQLKDI-----GADDIVLLKQK---LEDGQVKLQSRLEE------EEEAKAALLSR 470

  Fly   442 -QAHDKL------RSHVSELKNKLDQREQAQFGNE----------------------NTNGDNEM 477
             |...||      ....|.|.::.:.|.:..||.|                      :..|::|:
plant   471 IQRLTKLILVSTKNPQASRLPHRFNPRRRHSFGEEELAYLPYKRRDMMDDEQLDLYVSVEGNHEI 535

  Fly   478 RDFSLLVNRVHVELQRTQEELESQGH--------ESRQRLSSRS--------------------- 513
            ||            ...:||.:::.|        :.|...||.|                     
plant   536 RD------------NAYREEKKTRKHGLLNWLKPKKRDHSSSASDQSSVVKSNSTPSTPQGGGSH 588

  Fly   514 -HTEGGESGGDEVHEMLHSHSE-----EYTNKQMNFAGELRNINRQLDLKQELHERIMRNFSRLD 572
             |||...|.|..:.|.|....|     |.::.:|........::.:|||.:| .::|:       
plant   589 LHTESRLSEGSPLMEQLSEPREDREALEDSSHEMEIPETSNKMSDELDLLRE-QKKIL------- 645

  Fly   573 SDDEDVKLRLCNQKIDDLEA----ERRDLMDQLRNIKSKDISAKLAEERRKRLQLLEQEISD--- 630
              .|:..|:|.:.|....||    :..::.:::: :.:.||.||     ..::..||::|.|   
plant   646 --SEEAALQLSSLKRMSDEAAKSPQNEEINEEIK-VLNDDIKAK-----NDQIATLERQIMDFVM 702

  Fly   631 -----LRRKLITQANLLKIRDKEREKIQNLS--------------TEIR---------------- 660
                 |.:..|.|| :.::||:..||...|.              .|:|                
plant   703 TSHEALDKSDIMQA-VAELRDQLNEKSFELEVIELFLFMQFFFIYAEVRDGFAIAWIRLFILAQY 766

  Fly   661 -----TMKESKVKLIRAMRGESEKFRQWKMV-------REKELTQLKSKDRKMQSEIVRQQTLHS 713
                 ..|.|.|.:|:....:.:.....|::       ......|:|:.|.:     :.||||:.
plant   767 YLSSYLNKVSSVYIIKYQYSKRQTILTMKLMVCSTLFSHSSSCLQVKAADNR-----IIQQTLNE 826

  Fly   714 K--QRQVLKRKCEEALAANKRLKDALERQASAQAQRHKYKDNGGSAAGSSNANAKTDSWVDRELE 776
            |  :.:||:   ||.....::|.:|||     .||..|.|                         
plant   827 KTCECEVLQ---EEVANLKQQLSEALE-----LAQGTKIK------------------------- 858

  Fly   777 IILSLIDAEHSLEQLMEDRAVINNHYHLLQQEKTSDPAEAAEQARILASLEEELEMRNAQISDLQ 841
                                                  |..:.|:.|:..:|:||:||.::::..
plant   859 --------------------------------------ELKQDAKELSESKEQLELRNRKLAEES 885

  Fly   842 QKVCPTDLDSRIRSLAEGVQSLG--ESRTVSKQLLKTLVQQRRLQA---------SSLNEQRTTL 895
                         |.|:|:.|..  |.:.:|:::.|.:.|..||.|         :..|:..||.
plant   886 -------------SYAKGLASAAAVELKALSEEVAKLMNQNERLAAELATQKSPIAQRNKTGTTT 937

  Fly   896 ---DELRAQLLDAQQQEDAASKRLRLLQSQHEEQMLAQQRAYEEKVSVLIRTANQRWAE-ARSPA 956
               :..|.:.|..:|:.|:.|..|:......:|:.|:.:.|..||        .||.|| .|...
plant   938 NVRNNGRRESLAKRQEHDSPSMELKRELRMSKERELSYEAALGEK--------EQREAELERILE 994

  Fly   957 EDQQRNQILEELLSSREALQQELDKLRAKNKSKSKAVKSEPQD 999
            |.:||...||..|::...|   :.|||     :|:...||..|
plant   995 ETKQREAYLENELANMWVL---VSKLR-----RSQGADSEISD 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 133/343 (39%)
Smc <453..>985 CDD:440809 129/659 (20%)
Metallothio <1071..1115 CDD:395080
AT3G12020NP_001189866.1 KISc_CENP_E 69..388 CDD:276825 132/338 (39%)
SMC_prok_B <372..>1041 CDD:274008 164/825 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.