DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp3A and kif21b

DIOPT Version :9

Sequence 1:NP_001284830.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:XP_004910777.1 Gene:kif21b / 779607 XenbaseID:XB-GENE-981200 Length:1625 Species:Xenopus tropicalis


Alignment Length:1360 Identity:364/1360 - (26%)
Similarity:603/1360 - (44%) Gaps:314/1360 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSEDPSCVAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVNRNESYTYNYVFDIDDSQKDLF 65
            |.|:....|.||||:||....|...||||.....| |.|||.:.:::::||::|||:|..|..::
 Frog     1 MGSQGDCSVRVALRIRPQSSKEQTEGCRICTWVYA-GEPQVLLGKDKAFTYDFVFDMDTDQIQVY 64

  Fly    66 ETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVL-DDHVGVIPRAVHDIFTAIAEMQS 129
            ||||:..|:....|||.|:|||||||:|||:|||:.|:.|: ::.:|:|||||..:|:.|.|.::
 Frog    65 ETCVRGLVEGCFQGYNATVLAYGQTGAGKTHTMGSGFDLVVTEEELGIIPRAVRQLFSTIQEHKA 129

  Fly   130 --------EFRFAVTCSFVELYQEQFYDLFS-SKTRD----KATVDIRE-VKNRIIMPGLTELVV 180
                    |..|.|:..|:|||.|:..|||. |:..|    |:.:.|.| ....|.:.|.:...|
 Frog   130 SAYERGLPEPSFKVSAQFLELYNEEILDLFDVSRDPDSRYRKSNIRIHEDASGGIYVSGASIRSV 194

  Fly   181 TSAQQVTDHLIRGSAGRAVAATAMNETSSRSHAIFTLTLVATKLD---GKQS------VTTSRFN 236
            :|..::...|..|:..|..|:|.||..||||||||::.|..|::.   .|.|      ..|::|:
 Frog   195 SSEGELLQLLKEGALSRTTASTQMNSQSSRSHAIFSVHLQQTRVSETCSKDSSSLEYETLTAKFH 259

  Fly   237 LVDLAGSERCSKTLASGDRFKEGVNINKGLLALGNVINALG-SGQAAGYIPYRQSKLTRLLQDSL 300
            .||||||||..:|.|:|:|.:||::||.|||||||||:||| ..:...::|||.|||||||||||
 Frog   260 FVDLAGSERLKRTGATGERAREGISINCGLLALGNVISALGDQSKKVLHVPYRDSKLTRLLQDSL 324

  Fly   301 GGNSITLMIACVSPADYNVAETLSTLRYADRALQIKNKPVVNLDPHAAEVNMLKDVIQKLRVEL- 364
            ||||.|:|||||||:|.:..|||:||:||:||..|||:...|.:....:|..|:..:.::::|| 
 Frog   325 GGNSQTMMIACVSPSDRDFMETLNTLKYANRARNIKNRVTANQEQSGQQVQALRAELARVKLELQ 389

  Fly   365 --LSGGKMS------------SSLISAVGAAGLGAIPCEES----------LAGSMA-------- 397
              .:|.:::            |.|.|...:..|.....:|:          :||..|        
 Frog   390 EYKTGHRVAGNDSLSDMCQELSMLRSENASLRLRVTALQEAIRAINARVTRMAGQEAAHLVQRAG 454

  Fly   398 -NAAEIQRL-------KEQVRTLQDRNRKLQQELHQSLLDLTEKEM-------RAHIAEQAHDKL 447
             :..|||.|       .|::||....:..:.:.|.:||...|.:.:       ...:.::|::.:
 Frog   455 DSNEEIQTLIQNYIHEIEELRTRLVESEAMNESLRRSLSRSTARSLVTGPATPTPSLEKEANEVV 519

  Fly   448 RSHVSELKN-------------KLDQREQAQFGNENTNGDNEMRDFSLLVNRVHVELQRTQEELE 499
            |....|::|             |...::|.|...|....:.|..|       .|.|.:..:||.|
 Frog   520 RRAKEEVQNLKKKGSSLQSDNYKKSLKQQLQISEETDYNEGEEED-------DHEESECDEEESE 577

  Fly   500 SQGHESRQRLSSRSHTEG--------GESGGDEVHEML-------------HSHSEEYTNKQMNF 543
            ..| ||.....|....:|        ..||...:...|             .|.|..:..::.:.
 Frog   578 GSG-ESEAESDSEPEEKGLGCWDAGKKSSGPLSLWAPLTQAGSLQAPPPSQPSPSLPFCMEEGSL 641

  Fly   544 AGELRNINRQLDLKQELHERIMRNFSRLDS--DDEDVKLRLCNQKIDDLEAERRDLMDQLRNIK- 605
            .|:|.::..::::||.|.|.:.::..||.:  ...:.||:....:|.|.:.||..::.:|.::: 
 Frog   642 GGDLADLTCEIEIKQRLIEELEQSQRRLQTLKLQYEEKLQQLQSRIRDTQLERDRVLRELSSMEC 706

  Fly   606 -SKDISAKLAEERRKRLQLLEQEISDLRRKLITQANLLKIRDKEREKIQNLSTEIRTMKESKVKL 669
             :::.:.|:..:..|:|:.:.:::..|:........|||.:.:...:::.|..|:..||::|..|
 Frog   707 YTEEKANKIRADYEKKLREMNRDLQKLQLAQREHTRLLKNQSRYERELKKLQMELSDMKKAKSAL 771

  Fly   670 IRAMRGESEKFRQWKMVREKELTQLKSKDRKMQSEIVRQQTLHSKQRQ---VLKRKCEEALAANK 731
            ::.||.|.:..:..:..|.||:.|||.:..:.:..|   :.|.|::||   ||:||.:| ::|.:
 Frog   772 MKQMREEQQLRKLAESRRNKEIAQLKKEHHRQELHI---RALESQKRQQEIVLRRKTQE-VSALR 832

  Fly   732 RLKDALERQASAQAQR-HKYKDNGGSAAGSSNANAKTDS-------------------------- 769
            ||.   .||......| |...|:|...: :|.|:::.||                          
 Frog   833 RLS---RRQTDRSGGRSHSVADSGAELS-TSTASSEPDSSLRSVSSIVRHWNRKTSGDVGPVPNG 893

  Fly   770 ----------------------W--VDREL-EII---LSLIDAEHSLEQLMEDRAVINNHYHLLQ 806
                                  |  ::|.: |::   |:|::.|..:|:|:..|..::    |||
 Frog   894 SRTPRRKGVRPGLPLSKAAHMKWQTLERRVHEVVLQRLTLLNLESDMERLLRKREELS----LLQ 954

  Fly   807 QEKTSD----PAEAAEQARILASLEEELE------------MRNAQISDLQQKVCPTDLDSRIRS 855
            :...|.    |.:...:.:....:.||||            :|..|.:.:|.:....||||...|
 Frog   955 EALISRSIALPEDRKAEEKSQQDVAEELEALTANIDYVNDCIRECQATIVQMEETKEDLDSTDTS 1019

  Fly   856 LAEGVQSLGESRTVSKQLLKTLVQQRRLQASSLNEQRTTLDE-LRAQLLDAQQQEDAASKRLRLL 919
            :.                         :.:.||.|.|..||. |||.:          .|.|::.
 Frog  1020 VV-------------------------ISSCSLTEARHLLDNFLRASI----------DKGLQVA 1049

  Fly   920 QSQHEEQMLAQQRAYEEKVSVLIRTANQRWAEARSPAED----QQRNQILEELLSSREALQQELD 980
            |.:.:.::|                      |||....|    .|.:.:||:  |...::||..:
 Frog  1050 QKEAQIRIL----------------------EARIRQTDMAGLSQAHMLLEK--SECHSVQQAEN 1090

  Fly   981 KLRAKNKSKSKAVKSEPQDLDDSFQIVDGNETVVLSDVSDDPDWVPSTSKSKRIQSDSRNVISP- 1044
            ...:.::..|:.  |:..|...||..:.|      |...||..|......|.::::.|...:|| 
 Frog  1091 GYASTDEEVSEI--SQTSDGSASFSSMKG------SCSQDDFKWKGEPRLSWQVKAVSAESLSPL 1147

  Fly  1045 PEKQDANVTSLGNSSIQSLNSTSATED--GKRCKGCKCR----------------------TKCT 1085
            .|....|:|    .|:.||  |...||  |....|.:.|                      |...
 Frog  1148 LEASTRNIT----KSLASL--TDILEDVGGFSPSGLRGRASHSLTLPIRGNTFPRQSRGFNTSPV 1206

  Fly  1086 TKRCGCLSGNNACSETCVCKSNC-----RNPLNLKDHASQCGDGDGQKDETEDADKSDDD 1140
            |:|.....|....|::.:...:.     ||..|:....:.........|:::::|.|..|
 Frog  1207 TRRKSYDRGQPRASDSNLTPPSSPPMRPRNDKNVFSRLTSSQSSGTALDKSDESDSSFSD 1266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_001284830.1 KISc_KIF4 7..336 CDD:276823 162/353 (46%)
Kinesin 14..335 CDD:278646 158/345 (46%)
Smc <396..>994 CDD:224117 147/737 (20%)
FlaC 522..633 CDD:225888 22/127 (17%)
TCR 1075..1110 CDD:281618 7/61 (11%)
kif21bXP_004910777.1 KISc_KIF4 7..360 CDD:276823 162/353 (46%)
KISc 8..366 CDD:214526 165/358 (46%)
FliJ 660..823 CDD:280262 39/165 (24%)
PKK 669..805 CDD:289257 30/135 (22%)
DUF5102 <855..950 CDD:293709 13/95 (14%)
WD40 1288..1600 CDD:238121
WD40 1294..>1602 CDD:225201
WD40 repeat 1340..1376 CDD:293791
WD40 repeat 1403..1438 CDD:293791
WD40 repeat 1447..1488 CDD:293791
WD40 repeat 1495..1530 CDD:293791
WD40 repeat 1536..1572 CDD:293791
WD40 repeat 1578..1600 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D74122at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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