DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp3A and kifc3

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:XP_068071048.1 Gene:kifc3 / 568367 ZFINID:ZDB-GENE-030131-3724 Length:1102 Species:Danio rerio


Alignment Length:358 Identity:130/358 - (36%)
Similarity:201/358 - (56%) Gaps:38/358 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VAVALRVRPLVQSELDRGCRIAVERSADGAPQVTV-----------NRNESYTY--NYVFDIDDS 60
            :.|..||||:...|.|         :||....||.           |:.:..|:  :.||....:
Zfish   692 IRVLCRVRPVCAGEAD---------AADTKNLVTFDPEDDAVLYLSNKGKLMTFELDKVFTTQAT 747

  Fly    61 QKDLFETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDHVGVIPRAVHDIFTAIA 125
            |:::|:. ||:.|...::|:||.|.|||||||||||||    .|:.:| .|:..||:..:|:.::
Zfish   748 QEEVFQE-VQSLVTSCIDGFNVCIFAYGQTGSGKTYTM----EGIPED-PGINQRALRLLFSEVS 806

  Fly   126 EMQSEFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIR---EVKNRIIMPGLTELVVTSAQQVT 187
            |.:.::.:.:|.|.||:|.|...:|......:|  :||:   :...::.:|||:|..|.|.:.:.
Zfish   807 EKKPDWDYKITVSMVEIYNETLRNLLGDNPNEK--LDIKMCPDGSGQLYVPGLSEFTVESVEDIN 869

  Fly   188 DHLIRGSAGRAVAATAMNETSSRSHAIFTLTLVA-TKLDGKQSVTTSRFNLVDLAGSERCSKTLA 251
            .....|...||.|.|.:||.||||||:..:|:.. ....|.:  |:.:.||||||||||.:|:.|
Zfish   870 KVFDLGHMNRATACTNLNEHSSRSHALLIITVAGFNSSTGHR--TSGKLNLVDLAGSERIAKSGA 932

  Fly   252 SGDRFKEGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPAD 316
            .|.|.:|...|||.|.|||:|||:|.|..:  ::|:|.|:||.||||||.|:|.|||:..|||.:
Zfish   933 EGSRLREAQCINKSLSALGDVINSLRSKHS--HVPFRNSRLTYLLQDSLSGDSKTLMMVQVSPLE 995

  Fly   317 YNVAETLSTLRYADRALQIKNKPVVNLDPHAAE 349
            .|::|::.:|::|.|...::..|..:.....||
Zfish   996 SNISESVCSLKFAQRVRTVEIGPSSSSSRRQAE 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 127/343 (37%)
Smc <453..>985 CDD:440809
Metallothio <1071..1115 CDD:395080
kifc3XP_068071048.1 SMC_prok_B <308..653 CDD:274008
KISc_C_terminal 689..1016 CDD:276817 127/344 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.